Table 1 The table shows the main characteristics of each BioProject, including the platform used for coding and non-coding RNA-sequencing, the reference paper and the type of cells analysed.
From: An integrated analysis of multiple datasets reveals novel gene signatures in human granulosa cells
mRNA Datasets | ||||
|---|---|---|---|---|
BioProject | Article reference | Instrument | Source name | Treatment |
PRJNA216966 | Characterization of the human cumulus cell transcriptome during final follicular maturation and ovulation12 | HiSeq 2000 | Cumulus granulosa GV/M2 | Cumulus Cells from Germinal vesicles unstimulated cumulus-oocyte-complex (COC) and from M2 cumulus of expanded/stimulated COC |
PRJNA649934 | Molecular Features of PCOS by Transcriptome Analysis of Oocytes and Cumulus Cells13 | HiSeq XTen | oocyte/cumulus | non-PCOS controlled ovarian stimulation using the GnRH antagonist protocols |
PRJNA200696 | Small RNA-seq of Human Granulosa Cells Reveals miRNAs in FSHR and Aromatase Genes14 | HiSeq 2000 | preovulatory cumulus and mural granulosa cells | Stimulation protocol: GnRH antagonist, rFSH, hCG |
Small RNA Datasets | ||||
PRJNA417973 | Differential miRNA Expression Profiles in Cumulus and Mural Granulosa Cells from Human Pre-ovulatory Follicles15 | NextSeq 500 | Cumulus and Mural Granulosa Cells | Â |
PRJNA200699 | Small RNA-seq of Human Granulosa Cells Reveals miRNAs in FSHR and Aromatase Genes14 | Genome Analyzer IIx | preovulatory Cumulus and Mural granulosa cells | Stimulation protocol: GnRH antagonist, rFSH, hCG |
