Table 10 The summary of noncoding RNA genes.
Type | Number | Average length (bp) | Total length (bp) | % of genome | Number | Average length (bp) | Total length (bp) | % of genome | |
|---|---|---|---|---|---|---|---|---|---|
Cashmere goat genome | Saanen goat genome | ||||||||
miRNA | 11,248 | 96.88 | 1,089,664 | 0.0394 | 11,194 | 96.80 | 1,083,559 | 0.0402 | |
tRNA | 34,806 | 72.83 | 2,534,871 | 0.0918 | 34,881 | 72.80 | 2,539,360 | 0.0942 | |
rRNA | rRNA | 756 | 202.51 | 153,099 | 0.0055 | 559 | 138.89 | 77,637 | 0.0029 |
18S | 78 | 457.69 | 35,700 | 0.0013 | 64 | 202.75 | 12,976 | 0.0005 | |
28S | 256 | 298.98 | 76,540 | 0.0028 | 183 | 204.30 | 37,387 | 0.0014 | |
5.8S | 19 | 147.32 | 2,799 | 0.0001 | 8 | 126 | 1,008 | 0.0001 | |
5S | 403 | 94.44 | 38,060 | 0.0014 | 304 | 86.40 | 26,266 | 0.0010 | |
snRNA | snRNA | 2,003 | 116.01 | 232,367 | 0.0084 | 1,989 | 116.18 | 231,091 | 0.0086 |
CD-box | 305 | 94.97 | 28,966 | 0.001 | 295 | 94.74 | 27,948 | 0.0010 | |
HACA-box | 360 | 133.99 | 48,236 | 0.0017 | 362 | 133.66 | 48,385 | 0.0018 | |
splicing | 1,270 | 113.73 | 144,435 | 0.0052 | 1,257 | 133.69 | 142,913 | 0.0053 | |
scaRNA | 58 | 174.31 | 10,110 | 0.0004 | 64 | 171.45 | 10,973 | 0.0004 | |
