Table 7 The summary of the repetitive sequences in the cashmere goat genome.
Type | Size (bp) | Ratio in genome (%) |
---|---|---|
DNA transposon | 7,777,067 | 0.28 |
LINE | 1,103,767,926 | 39.96 |
LTR retrotransposon | 376,699,905 | 13.63 |
SINE | 3,843,363 | 0.14 |
Satellite | 66,729,370 | 2.42 |
Simple repeat | 483,528 | 0.02 |
Unknown | 45,447,675 | 1.65 |
Total TE | 1,333,288,400 | 48.26 |