Table 3 Pearson correlation coefficient between different biological replicates of RNA-seq, Ribo-seq and CLIP-seq samples.
From: Transcriptome and translatome profiling of Col-0 and grp7grp8 under ABA treatment in Arabidopsis
Type | Samples | Samples group | Pearson correlation coefficient |
|---|---|---|---|
RNA-seq | Mock Col-0 | rep1 vs. rep2 | 0.992 |
rep1 vs. rep3 | 0.991 | ||
rep2 vs. rep3 | 0.991 | ||
Mock grp7grp8 | rep1 vs. rep2 | 0.988 | |
rep1 vs. rep3 | 0.987 | ||
rep2 vs. rep3 | 0.991 | ||
ABA Col-0 | rep1 vs. rep2 | 0.986 | |
rep1 vs. rep3 | 0.987 | ||
rep2 vs. rep3 | 0.99 | ||
ABA grp7grp8 | rep1 vs. rep2 | 0.992 | |
rep1 vs. rep3 | 0.99 | ||
rep2 vs. rep3 | 0.989 | ||
Ribo-seq | Mock Col-0 | rep1 vs. rep2 | 0.984 |
rep1 vs. rep3 | 0.983 | ||
rep2 vs. rep3 | 0.983 | ||
Mock grp7grp8 | rep1 vs. rep2 | 0.989 | |
rep1 vs. rep3 | 0.987 | ||
rep2 vs. rep3 | 0.987 | ||
ABA Col-0 | rep1 vs. rep2 | 0.966 | |
rep1 vs. rep3 | 0.967 | ||
rep2 vs. rep3 | 0.97 | ||
ABA grp7grp8 | rep1 vs. rep2 | 0.983 | |
rep1 vs. rep3 | 0.983 | ||
rep2 vs. rep3 | 0.982 | ||
CLIP-seq | Mock pGRP7::GRP7-GFP grp7 | rep1 vs. rep2 | 0.847 |
ABA pGRP7::GRP7-GFP grp7 | rep1 vs. rep2 | 0.887 |
