Table 2 Annotation of repeat elements in the Gynaephora qinghaiensis genome.
From: Genome assembly of the grassland caterpillar Gynaephora qinghaiensis
Type | Number of elements | Length (bp) | Percent (%) |
|---|---|---|---|
SINEs | 14,457 | 2,252,336 | 0.26 |
LINEs | 1,173,819 | 192,607,078 | 22.37 |
LTRs | 395,039 | 70,651,345 | 8.21 |
DNAs | 175,929 | 45,779,223 | 5.32 |
Rolling-circles | 478,722 | 85,657,418 | 9.95 |
Unclassified | 1,021,157 | 165,906,701 | 19.27 |
Small RNA | 953 | 138,190 | 0.02 |
Satellites | 1,133 | 300,604 | 0.03 |
Simple repeats | 163,846 | 16,162,256 | 1.88 |
Low complexity | 15,412 | 743,971 | 0.09 |
Total | 3,440,467 | 580,199,122 | 67.4 |
