Fig. 4

Quality of the scRNA-seq dataset. (a) Violin plots showing the percentage of counts from mitochondrial genes and number of unique genes per cell, split by sample. (b) Violin plots showing the percentage of counts from mitochondrial genes and number of unique genes per cell, split by sequencing set. (c) Heatmap clustering of correlation coefficients across the sequencing sets. (d) PCA plot of the final dataset, colored by sequencing sets. (e) Distribution of cells from each sequencing set together in the final UMAP embedding. (f) Distribution of cells from each sequencing set separately in the final UMAP embedding.