Table 2 Genome annotation statistics.
From: Chromosome-scale genomes of wild and cultivated Morinda officinalis
Morinda officinalis (Gao ji 3 cultivated) | Morinda officinalis (cultivated) | Morinda officinalis (wild) | |
|---|---|---|---|
Number of protein-coding genes | 27,698 | 29,528 | 31,308 |
Percentage of functional annotation genes (%) | 91.39 | 91.25 | 91.49 |
BUSCOs completeness of annotation (%) | 96.80 | 96.4 | 97.1 |
Average gene length (bp) | 1,169 | 2,881 | 2,785 |
Average exon length (bp) | 233.6 | 214.38 | 225.97 |
Average exon number per gene | 5.0 | 4.79 | 4.56 |
Average intron length (bp) | 647.53 | 488.59 | 492.82 |
Number of miRNAs | 78 | 77 | 79 |
Number of tRNAs | 644 | 544 | 571 |
Number of rRNAs | 209 | 625 | 304 |
Number of snRNA | 207 | 1045 | 1087 |
Percentage of repeat sequence (%) | 58.04 | 50.80 | 50.09 |
SINE (%) | 0.16 | 0.02 | 0.001 |
LINE (%) | 6.97 | 4.82 | 5.0 |
LTR (%) | 35.79 | 35.36 | 34.49 |
