Table 2 Statistics of repeat annotations of A. aspergillum.
From: The high-quality telomere-to-telomere genome assembly of the earthworm (Amynthas aspergillum)
Type | Sequence length (bp) | Percentage of the genome (%) | |
---|---|---|---|
Transposable elements | LINEs | 58,870,972 | 7.76 |
SINEs | 2,441,270 | 0.32 | |
LTR-RTs | 86,816,877 | 11.44 | |
DNA transposon | 151,509,405 | 19.97 | |
Other | 2,088 | 0 | |
Unknown | 32,312 | 0 | |
Tandem repeats | microsatellite (1–9 bp units) | 28,471,601 | 3.75 |
minisatellite (10–99 bp units) | 20,117,127 | 2.65 | |
satellite (> = 100 bp units) | 26,075,171 | 3.44 | |
Total | 374,336,823 | 49.33 |