Table 5 Classification of non-coding RNAs in the P. h. homarus genome.
From: Chromosome-level genome assembly of scalloped spiny lobster Panulirus homarus homarus
nc RNA type | Copy (w*) | Average length (bp) | Total length (bp) | Proportion in Genome (%) | |
|---|---|---|---|---|---|
miRNA | 20,765 | 176.05 | 3,655,685 | 0.13 | |
tRNA | 3,608 | 74 | 266,988 | 0.009814 | |
rRNA | rRNA | 1,421 | 168.66 | 239,664 | 0.00881 |
18S | 1,169 | 183.93 | 215,009 | 0.007903 | |
28S | 13 | 131.92 | 1,715 | 0.000063 | |
5.8S | 0 | 0 | 0 | 0 | |
5S | 239 | 95.98 | 22,940 | 0.000843 | |
snRNA | snRNA | 3,066 | 219.44 | 67,2801 | 0.024731 |
CD-box | 2,434 | 206.85 | 50,3467 | 0.018507 | |
HACA-box | 419 | 314.63 | 131,832 | 0.004846 | |
splicing | 123 | 146.29 | 17,994 | 0.000661 | |
