Fig. 1

Characteristics of the Pinctada maxima genome. (A) Hi-C interaction heat map of Pinctada maxima. (B) Circos plot of the P. maxima genome assembly. (a) The length of chromosomes in the size of Mb. (b) Density of genes with 500 kbp windows; (c) GC content with 500 kbp windows; (d) depth of coverage of PacBio HiFi reads with 100 kbp windows; (e) depth of coverage of Illumina short reads with 100 kbp windows; (f) distribution of heterozygous SNPs with 500 kbp windows.