Table 2 Sequencing data used for the assembly and annotation of Colochirus anceps genome.
From: Chromosome-level genome assembly of the sea cucumber, Colochirus anceps
libraries | Raw data (Gb) | Coverage (×) | Mean read length (bp) | SRA accession | |
|---|---|---|---|---|---|
Illumina reads | 374.0 | 160.28 | 150 | SRR31917503 | |
PacBio reads | 91.4 | 39.17 | 10630 | SRR31917502 | |
Hi-C | 249.9 | 107.25 | 150 | SRR31917492 SRR31917500 SRR31917501 | |
RNA-seq | muscle | 6.25 | 2.68 | 150 | SRR31917499 |
body wall | 6.99 | 3.00 | 150 | SRR31917498 | |
intestine | 7.90 | 3.39 | 150 | SRR31917496 | |
respiratory tree | 9.42 | 4.04 | 150 | SRR31917494 | |
gonad | 6.03 | 2.58 | 150 | SRR31917497 | |
tentacle | 6.40 | 2.74 | 150 | SRR31917493 | |
nerve ring | 8.39 | 3.60 | 150 | SRR31917495 | |
total | 51.39 | 22.02 | 150 | — | |
