Table 6 Statistics of non-coding RNA annotation.
From: Chromosome-level genome assembly of the sea cucumber, Colochirus anceps
Type | Copy(w) | Average length (bp) | Total length (bp) | % of genome | |
|---|---|---|---|---|---|
miRNA | miRNA | 1,458 | 118.205 | 172,343 | 0.007 |
tRNA | tRNA | 38,549 | 74.706 | 2,879,855 | 0.120 |
rRNA | rRNA | 7,136 | 193.594 | 1,381,490 | 0.057 |
18S | 2,523 | 240.110 | 605,798 | 0.025 | |
28S | 4,034 | 179.685 | 724,849 | 0.030 | |
5.8S | 447 | 98.121 | 43,860 | 0.002 | |
5S | 132 | 52.902 | 6,983 | 0.000 | |
snRNA | snRNA | 2,300 | 152.276 | 350,234 | 0.015 |
CD-box | 216 | 191.389 | 41,340 | 0.002 | |
HACA-box | 15 | 193.267 | 2,899 | 0.000 | |
splicing | 1,945 | 140.024 | 272,347 | 0.011 | |
scaRNA | 7 | 172.286 | 1,206 | 0.000 | |
Unknown | 117 | 277.282 | 32,442 | 0.001 | |
