Table 3 A total of 111 significantly associated SNPs in maize detected by GWAS.
From: Genome-wide association analysis identifies loci governing mercury accumulation in maize
Trait | Marker | Chr | Position | p | MarkerR2 |
|---|---|---|---|---|---|
Axis | chr1.S_206512615 | 1 | 206512615 | 1.02E-05 | 0.09515 |
Axis | chr1.S_206513913 | 1 | 206513913 | 1.02E-05 | 0.09515 |
Axis | chr1.S_242708944 | 1 | 242708944 | 1.86E-08 | 0.15866 |
Axis | chr1.S_242710182 | 1 | 242710182 | 8.44E-05 | 0.07368 |
Axis | chr1.S_289788237 | 1 | 289788237 | 9.97E-05 | 0.07452 |
Axis | chr3.S_91357195 | 3 | 91357195 | 7.87E-05 | 0.0719 |
Axis | chr6.S_107179621 | 6 | 107179621 | 7.66E-05 | 0.07735 |
Axis | chr6.S_155668107 | 6 | 155668107 | 5.75E-05 | 0.08035 |
Axis | chr8.S_8290083 | 8 | 8290083 | 1.30E-05 | 0.09392 |
Axis | chr8.S_8290137 | 8 | 8290137 | 4.65E-05 | 0.0831 |
Axis | chr8.S_8290190 | 8 | 8290190 | 1.09E-05 | 0.09618 |
Axis | chr8.S_8290329 | 8 | 8290329 | 1.09E-05 | 0.09618 |
Bracts | chr5.S_921802 | 5 | 921802 | 6.08E-05 | 0.08303 |
Bracts | chr5.S_6141833 | 5 | 6141833 | 8.92E-05 | 0.07592 |
Bracts | chr5.S_215965598 | 5 | 215965598 | 9.25E-05 | 0.08033 |
Bracts | chr6.S_163920776 | 6 | 163920776 | 3.44E-05 | 0.0852 |
Bracts | chr6.S_164498297 | 6 | 164498297 | 9.20E-05 | 0.08036 |
Bracts | chr7.S_176391688 | 7 | 176391688 | 6.31E-05 | 0.08489 |
Bracts | chr7.S_176391721 | 7 | 176391721 | 6.86E-05 | 0.08261 |
Bracts | chr7.S_176391728 | 7 | 176391728 | 6.86E-05 | 0.08261 |
Bracts | chr7.S_176391743 | 7 | 176391743 | 6.86E-05 | 0.08261 |
Bracts | chr8.S_13211217 | 8 | 13211217 | 9.29E-05 | 0.07336 |
Bracts | chr8.S_163741736 | 8 | 163741736 | 6.97E-05 | 0.07291 |
Bracts | chr9.S_7959782 | 9 | 7959782 | 7.05E-05 | 0.07163 |
Bracts | SYN39067 | 9 | 7960037 | 3.78E-05 | 0.08324 |
Bracts | chr9.S_14548691 | 9 | 14548691 | 2.04E-05 | 0.08317 |
Bracts | chr9.S_14548741 | 9 | 14548741 | 2.04E-05 | 0.08317 |
Bracts | chr9.S_14548749 | 9 | 14548749 | 2.04E-05 | 0.08317 |
Bracts | chr9.S_14548854 | 9 | 14548854 | 2.04E-05 | 0.08317 |
Bracts | chr9.S_14548892 | 9 | 14548892 | 2.04E-05 | 0.08317 |
Bracts | chr9.S_14548893 | 9 | 14548893 | 2.04E-05 | 0.08317 |
Bracts | chr9.S_14549008 | 9 | 14549008 | 2.04E-05 | 0.08317 |
Bracts | PZE-109058129 | 9 | 99366524 | 8.93E-05 | 0.07311 |
Bracts | chr9.S_105527159 | 9 | 105527159 | 1.31E-05 | 0.08712 |
Bracts | chr9.S_107622070 | 9 | 107622070 | 9.82E-05 | 0.07655 |
Bracts | chr9.S_115321300 | 9 | 115321300 | 3.74E-05 | 0.08445 |
Bracts | chr9.S_123408721 | 9 | 123408721 | 3.29E-05 | 0.08267 |
Bracts | chr9.S_123408722 | 9 | 123408722 | 3.29E-05 | 0.08267 |
Bracts | chr9.S_123408723 | 9 | 123408723 | 3.29E-05 | 0.08267 |
Kernels | chr1.S_6170206 | 1 | 6170206 | 9.58E-05 | 0.07241 |
Kernels | SYN9128 | 1 | 40355622 | 9.72E-05 | 0.06959 |
Kernels | chr1.S_60754581 | 1 | 60754581 | 2.85E-05 | 0.08256 |
Kernels | chr1.S_60754606 | 1 | 60754606 | 1.65E-05 | 0.08883 |
Kernels | chr1.S_80189675 | 1 | 80189675 | 5.84E-05 | 0.07783 |
Kernels | chr1.S_170305135 | 1 | 170305135 | 8.16E-05 | 0.0764 |
Kernels | PZE-101231477 | 1 | 280342748 | 2.06E-05 | 0.08907 |
Kernels | chr2.S_511207 | 2 | 511207 | 3.91E-05 | 0.08308 |
Kernels | chr3.S_2940421 | 3 | 2940421 | 1.38E-05 | 0.08861 |
Kernels | chr3.S_9935521 | 3 | 9935521 | 3.19E-05 | 0.08327 |
Kernels | chr3.S_9936025 | 3 | 9936025 | 2.63E-05 | 0.08496 |
Kernels | chr3.S_9936028 | 3 | 9936028 | 2.63E-05 | 0.08496 |
Kernels | chr3.S_151968221 | 3 | 151968221 | 9.42E-05 | 0.07339 |
Kernels | chr5.S_196250608 | 5 | 196250608 | 3.64E-06 | 0.10561 |
Kernels | chr7.S_130427527 | 7 | 130427527 | 9.31E-05 | 0.0753 |
Kernels | chr7.S_155614940 | 7 | 155614940 | 9.39E-05 | 0.07115 |
Kernels | chr8.S_128481917 | 8 | 128481917 | 3.64E-05 | 0.08179 |
Kernels | chr8.S_170833808 | 8 | 170833808 | 8.82E-05 | 0.07589 |
Kernels | chr8.S_170846071 | 8 | 170846071 | 8.82E-05 | 0.07589 |
Kernels | chr8.S_170846085 | 8 | 170846085 | 8.82E-05 | 0.07589 |
Kernels | chr8.S_170846136 | 8 | 170846136 | 8.82E-05 | 0.07589 |
Kernels | chr8.S_170847326 | 8 | 170847326 | 8.82E-05 | 0.07589 |
Kernels | chr8.S_170847485 | 8 | 170847485 | 8.82E-05 | 0.07589 |
Kernels | chr8.S_170847489 | 8 | 170847489 | 8.82E-05 | 0.07589 |
Kernels | chr8.S_170850217 | 8 | 170850217 | 8.82E-05 | 0.07589 |
Kernels | chr8.S_170850473 | 8 | 170850473 | 8.82E-05 | 0.07589 |
Kernels | chr8.S_170851375 | 8 | 170851375 | 8.82E-05 | 0.07589 |
Kernels | chr8.S_170851664 | 8 | 170851664 | 8.82E-05 | 0.07589 |
Kernels | chr8.S_170852211 | 8 | 170852211 | 8.82E-05 | 0.07589 |
Kernels | chr8.S_170852659 | 8 | 170852659 | 8.82E-05 | 0.07589 |
Kernels | chr8.S_170853700 | 8 | 170853700 | 8.82E-05 | 0.07589 |
Kernels | chr8.S_170853730 | 8 | 170853730 | 8.82E-05 | 0.07589 |
Kernels | chr8.S_170854083 | 8 | 170854083 | 8.82E-05 | 0.07589 |
Kernels | chr9.S_150656046 | 9 | 150656046 | 5.62E-05 | 0.08374 |
Kernels | chr9.S_150707606 | 9 | 150707606 | 3.89E-05 | 0.08631 |
Kernels | chr10.S_4682197 | 10 | 4682197 | 4.63E-05 | 0.08518 |
Kernels | chr10.S_148974418 | 10 | 148974418 | 4.52E-05 | 0.09246 |
Leaves | chr1.S_74416852 | 1 | 74416852 | 3.26E-05 | 0.07957 |
Leaves | chr1.S_74416853 | 1 | 74416853 | 3.26E-05 | 0.07957 |
Leaves | chr1.S_281320598 | 1 | 281320598 | 7.28E-05 | 0.07679 |
Leaves | chr2.S_175260655 | 2 | 175260655 | 4.08E-05 | 0.08417 |
Leaves | chr2.S_175260694 | 2 | 175260694 | 4.08E-05 | 0.08417 |
Leaves | chr4.S_239906146 | 4 | 239906146 | 1.69E-05 | 0.09172 |
Leaves | chr4.S_239929354 | 4 | 239929354 | 2.48E-05 | 0.08594 |
Leaves | chr5.S_6442336 | 5 | 6442336 | 6.67E-05 | 0.08171 |
Leaves | chr5.S_143198459 | 5 | 143198459 | 4.67E-05 | 0.07701 |
Leaves | chr5.S_176898742 | 5 | 176898742 | 7.22E-05 | 0.0749 |
Leaves | chr5.S_193558440 | 5 | 193558440 | 2.17E-05 | 0.08504 |
Leaves | chr8.S_20488572 | 8 | 20488572 | 5.42E-05 | 0.07478 |
Leaves | PZE-108038334 | 8 | 62522497 | 9.68E-05 | 0.07302 |
Leaves | chr8.S_128751246 | 8 | 128751246 | 6.89E-05 | 0.07321 |
Leaves | chr8.S_162579911 | 8 | 162579911 | 4.87E-05 | 0.07971 |
Leaves | chr9.S_7577801 | 9 | 7577801 | 4.06E-05 | 0.07991 |
Leaves | chr9.S_11233162 | 9 | 11233162 | 2.83E-05 | 0.08324 |
Leaves | chr9.S_11234080 | 9 | 11234080 | 8.19E-05 | 0.07324 |
Leaves | chr9.S_11234108 | 9 | 11234108 | 8.19E-05 | 0.07324 |
Leaves | chr9.S_134237753 | 9 | 134237753 | 5.17E-05 | 0.07637 |
Leaves | chr9.S_134237754 | 9 | 134237754 | 5.17E-05 | 0.07637 |
Leaves | chr9.S_134293724 | 9 | 134293724 | 5.89E-05 | 0.08125 |
Leaves | chr10.S_70916728 | 10 | 70916728 | 9.56E-05 | 0.06905 |
Stems | chr2.S_32492547 | 2 | 32492547 | 7.12E-06 | 0.09288 |
Stems | PZE-102107302 | 2 | 136419732 | 4.28E-05 | 0.08288 |
Stems | chr3.S_19784204 | 3 | 19784204 | 7.25E-05 | 0.07661 |
Stems | chr5.S_16425840 | 5 | 16425840 | 9.41E-05 | 0.07353 |
Stems | chr5.S_24609422 | 5 | 24609422 | 6.21E-05 | 0.07529 |
Stems | chr6.S_15236064 | 6 | 15236064 | 1.45E-05 | 0.08923 |
Stems | chr6.S_103987005 | 6 | 103987005 | 1.48E-05 | 0.09155 |
Stems | chr6.S_103987029 | 6 | 103987029 | 1.42E-05 | 0.09227 |
Stems | chr7.S_15426996 | 7 | 15426996 | 3.72E-06 | 0.10193 |
Stems | chr7.S_16096718 | 7 | 16096718 | 7.75E-05 | 0.07334 |
Stems | chr7.S_16096719 | 7 | 16096719 | 6.31E-05 | 0.07521 |
Stems | chr8.S_115638001 | 8 | 115638001 | 2.90E-05 | 0.08065 |
Stems | chr8.S_161469759 | 8 | 161469759 | 9.73E-05 | 0.07114 |
