Table 4 The estimated heritability and predicted genetic effects of all detected SNP loci for grain yield conditioned by its component traits.
QTS | Chr. | Allele | GYD|NP | GYD|NGFP | GYD|GW | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
Effect size | −log 10(P) | h 2(%) | Effect size | −log 10(P) | h 2(%) | Effect size | −log 10(I) | h 2(%) | |||
rs8203251 | 4 | C/T | −1.25 | 12.09 | 9.01 | −0.59 | 3.02 | 2.52 | −1.73 | 7.6 | 8.28 |
rs26302731 | 6 | G/A | −0.88 | 6.29 | 4.43 | ||||||
rs17926420 | 12 | C/A | −0.8 | 5.18 | 4.7 | −1.59 | 6.57 | 7.05 | |||
rs26662491 | 5 | A/C | −1.05 | 3.15 | 3.05 | ||||||
rs5137246 | 6 | T/G | |||||||||
rs12354751 | 9 | A/G | |||||||||
rs11756284 | 2 | T/G | −0.69 | 4.06 | 2.71 | ||||||
rs21512047 | 2 | C/T | −0.96 | 7.45 | 5.34 | ||||||
rs28361738 | 6 | G/A | −0.96 | 7.39 | 5.29 | ||||||
rs5137241 | 6 | T/C | 0.79 | 5.24 | 3.61 | ||||||
rs1508663 | 10 | T/G | −0.79 | 5.18 | 3.57 | ||||||
rs3063720 | 10 | G/A | −0.63 | 3.54 | 2.31 | ||||||
rs5738746 | 10 | G/A | −1.07 | 9.03 | 6.58 | ||||||
rs18309603 | 12 | A/G | −0.97 | 7.52 | 5.39 | ||||||
rs21260267 | 2 | C/T | −0.96 | 7.16 | 6.74 | ||||||
rs28567251 | 3 | T/C | −0.77 | 4.87 | 4.39 | ||||||
rs28377293 | 6 | G/C | −0.93 | 6.7 | 6.27 | ||||||
rs21456330 | 7 | T/C | −0.77 | 4.82 | 4.33 | ||||||
rs28331893 | 7 | A/C | −0.77 | 4.83 | 4.35 | ||||||
rs15874222 | 2 | T/A | 1.18 | 3.87 | 3.88 | ||||||
rs27371211 | 6 | G/A | −1.23 | 4.17 | 4.23 | ||||||
