Table 1 Alignment of the deduced amino acid sequences of goldfish steroidogenesis enzyme genes with those of other animal species.
Gene | GenBank No. | Amino acid sequence homology | Conserved domain |
---|---|---|---|
P450scc | JQ340311 | 91% (Gobiocypris rarus) | |
84% (Tautogolabrus adspersus) | |||
81% (Oryzias latipes) | |||
75% (Danio rerio) | |||
3-beta-HSD | JQ867353 | 91% (Gobiocypris rarus) | Partial sequence of cofactor binding motif: Gly–X–X–Gly–X–X–Gly11; Enzyme active site of short-chain alcohol dehydrogenase: Tyr–X–X–X–Lys |
87% (Danio rerio) | |||
77% (Oncorhynchus mykiss) | |||
76% (Clarias gariepinus) | |||
20-beta-HSD | KC193327 | 97% (Cyprinus carpio) | Adenine ring binding domain: X-Asp-X-X-Asp; Sequence for a β sheet: Gly-Gly-X-Asp-X-X-X-Asn-Asn-Ala-Gly-X; Active site: Thr-Asn-X-X-Gly-Thr-X-X-X-X-X; Substrate binding site: X-X-Asn-X-Ser-Ser-X; Enzyme active site: Tyr-X-X-X-Lys12, 13; Sequence regulating hydrogen bonds in nicotinamide ring: X-X-X-Asn-X-X-X-Pro-Gly-X-X-X-Thr14 |
90% (Danio rerio) | |||
80% (Tachysurus fulvidraco) | |||
79% (Oncorhynchus mykiss) | |||
17-beta-HSD1 | JX036034 | 86% (Danio rerio) | Coenzyme binding domain: Thr-Gly-X-X-X-Gly-X-Gly; Connection between coenzyme binding domain and substrate activation site: Asn-Ala-Gly; Enzyme active site: Tyr–X–X–Ser–Lys with Ser and Asn upstream; Sequence III directing reaction |
71% (Anguilla japonica) | |||
70% (Oreochromis niloticus) | |||
P45011beta | KC193328 | 85% (Danio rerio) | Steroid binding region; Oxygen binding region; Ozols’ region |
81% (Oreochromis niloticus) | |||
80% (Oryzias latipes) | |||
74% (Oncorhynchus mykiss) | |||
11-beta-HSD2 | KC193326 | 91% (Danio rerio) 82% (Anguilla japonica) 81% (Oncorhynchus mykiss) 80% (Clarias gariepinus) 78% (Oryzias latipes) | Coenzyme I binding domain: Gly-Phe-Gly; Conserved sequence of 11-beta-HSDs: Cys-Met-Glu-Val-Asn-Phe-Phe-Gly; Enzyme active site: Tyr-Gly-X-Ser-Lys-Ala-Ala |