Table 1 Partial selective TDF functional characterization based on BLASTN and BLASTX algorithms.

From: Differential transcript profiling alters regulatory gene expression during the development of Gossypium arboreum, G.stocksii and somatic hybrids

TDFs

Locus/gene ID

Annotation

Biological description

TDF211

Cotton_D_gene_10000106

Pectinesterase

cellular organization

TDF280

Cotton_A_09118

Acetylglucosaminyltransferase activity

membrane; Cellular Component

TDF507

Cotton_D_gene_10000255

Disease resistance protein RPS2

defense & response to stimuli

TDF557

Cotton_A_24432 Cotton_A_05650

Nucleobase:cation symporter-1, NCS1

defense & response to stimuli

TDF78

Cotton_A_12744

Family A (phosphoinositide binding specific) member 8

defense & response to stimuli

TDF199

Cotton_A_40094

CCA1 (CIRCADIAN CLOCK ASSOCIATED 1)

defense & response to stimuli

TDF275

Cotton_A_32310

Heat shock protein Hsp20

defense & response to stimuli

TDF57

Cotton_A_21512

RPS2 (RESISTANT TO P. SYRINGAE 2), disease resistance protein RPS2

defense & response to stimuli

TDF116

Cotton_D_gene_10019488

Zeta-carotene desaturase

general and secondary metabolism

TDF167

Cotton_D_gene_10009509

Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)

general and secondary metabolism

TDF293

Cotton_D_gene_10003262

Cytochrome P450, E-class, group I

general and secondary metabolism

TDF20

Cotton_A_00679

Auxin responsive SAUR protein

regulation

TDF113

Cotton_A_21823

Acyl-CoA N-acyltransferase

metabolic process; Biological Process

TDF264

Cotton_D_gene_10034692

Serine/threonine protein kinase Cdc7

regulation

Cotton_A_14578

TDF1

Cotton_D_gene_10037289

ARF guanyl-nucleotide exchange factor

signal transduction

TDF10

Cotton_D_gene_10001565

Gibberellin receptor GID1

signal transduction

TDF63

Cotton_A_32684

Serine/threonine-protein kinase CTR1

signal transduction

TDF177

Cotton_D_gene_10027381

bZIP transcription factor

Transcriptional regulation

TDF218

Cotton_A_32441

BAK1, brassinosteroid insensitive 1-associated receptor kinase 1

Transcriptional regulation

TDF232

Cotton_A_25131

Arginine/serine-rich splicing factor

Transcriptional regulation

Cotton_D_gene_10023361

TDF281

Cotton_A_37559

FAR1-related Transcription factor, Zinc finger

Transcriptional regulation

TDF497

Cotton_D_gene_10033422

MADS-box Transcription factor

Transcriptional regulation

TDF291

Cotton_D_gene_10015764

Translation elongation factor EFG/EF2

translation

Cotton_A_26279