Figure 2 | Scientific Reports

Figure 2

From: Evolutionary and network analysis of virus sequences from infants infected with an Australian recombinant strain of human parechovirus type 3

Figure 2

Maximum Likelihood (ML) phylogenetic trees based on either the capsid or nonstructural proteins encoding region of the 17 Australian 2013–2015 HPeV3 sequences. Sequences were aligned using Clustal W and phylogenetic analysis was conducted using MEGA version 6 and the Maximum Likelihood (ML) method. The tree with the highest log likelihood is shown. Bootstrap test involved 1000 replicates to determine reliability of the inferred tree. The numbers at nodes represent bootstrap values. Branch lengths are scaled according to the numbers of nucleotide substitutions per site. (A) Midpoint rooted tree based on the capsid encoding region from nucleotide 701–3013. (B) Midpoint rooted tree based on the nonstructural proteins encoding region from nucleotide 3014–7231.

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