Figure 6

Prediction accuracy of the breeding population. Prediction accuracy was measured as the Pearson’s correlation coefficient (r) between predicted genotypic values and phenotypic values. The prediction accuracy was calculated for combined all families. Only the mean prediction accuracy of all the methods is shown (Supplementary Fig. S10). Training populations are shown in the figure key. When the breeding population or combined parental and breeding populations were used as training sets, one family was excluded and its phenotype was predicted.