Table 1 Top-15 upregulated genes in the testes of PLAG1-deficient mice.

From: PLAG1 deficiency impairs spermatogenesis and sperm motility in mice

Gene symbol

Gene name

FDR

Log fold change

Counts per million

GO terms

WT

HET

KO

Molecular function

Cellular component

Biological process

Lcn9

Lipocalin 9

5.62E-22

11.485

0.0

0.03

64.3

Catalytic activity, Binding

Extracellular region

Metabolic process, Cellular process, Localization

4933400L20Rik

RIKEN cDNA 4933400L20 gene

5.62E-22

1.614

8.9

27.2

28

ND

ND

ND

Teddm1

Transmembrane epididymal protein 1 A

1.26E-17

9.823

0.07

0.1

54.8

ND

Membrane

ND

Lcn8

Lipocalin 8

2.81E-16

10.196

0.07

0.03

92.8

Catalytic activity, Binding

Extracellular region

Metabolic process, Cellular process, Localization

9230110F15Rik

RIKEN cDNA 9230110F15 gene

2.32E-15

10.761

0.0

0.0

22.7

ND

ND

ND

Ovch2

Ovochymase 2

8.46E-15

9.763

0.0

0.03

11.2

Catalytic activity

Extracellular region

Reproduction, Metabolic process

Adam28

A disintegrin and metallopeptidase domain 28

1.84E-14

10.465

0.03

0.03

45.4

Catalytic activity, Binding

Membrane

Reproduction, Apoptotic process, Multicellular organismal process, Development process

Gpx5

Glutathione peroxidase 5

1.45E-12

12.180

0.1

32.2

499.7

Catalytic activity, Antioxidant activity

Extracellular region, Extracellular matrix, Membrane

Immune system process, Metabolic process, Response to stimulus

5830403L16Rik (Teddm2)

Transmembrane epididymal family member 2

2.89E-12

3.594

1.2

0.96

15.4

ND

ND

ND

Defb25

Defensin beta 25

7.70E-12

8.565

0.03

0.07

15.4

ND

Cell part, Extracellular region

Immune system process, Response to stimulus

Gm4846

Predicted gene 4846

3.65E-11

4.586

1.5

1.5

37.1

Catalytic activity

ND

Metabolic process

Cst11

Cystatin 11

3.30E-10

7.700

0.2

0.7

46.07

Catalytic activity, Binding, Enzyme regulator activity

Extracellular region

Metabolic process, Biological regulation

Lcn10

Lipocalin 10

5.86E-10

12.554

0.0

0.13

21.3

Catalytic activity, Binding

Extracellular region

Metabolic process, Cellular process, Localization

Gm3428

Predicted gene 3428

6.83E-10

8.739

0.0

0.0

1.5

ND

ND

ND

Defb47

Defensin beta 47

3.47E-09

7.162

0.2

0.1

31.1

ND

ND

Immune system process, Metabolic process, Response to stimulus

  1. FDR, false-discovery rate; GO, gene ontology; HET, heterozygote; KO, knock-out; ND, not determined; WT, wild-type.