Table 4 Measures of SSR diversity for Tulasnella prima sampled at sites in Kosciuszko National Park: Number of isolates (N), number of alleles (Na), observed heterozygosity (H o ), expected heterozygosity (H e ), unbiased expected heterozygosity (uH e ), fixation index (F) and significance for Hardy-Weinberg equilibrium before and after Bonferroni correction.
From: Population structure of an orchid mycorrhizal fungus with genus-wide specificity
Site | Locus | N | Na | H o | H e | uH e | F | HWE | HWE (Bonferroni) |
---|---|---|---|---|---|---|---|---|---|
AC | Tul 2 | 15 | 4 | 0.467 | 0.542 | 0.561 | 0.139 | * | ns |
Tul 11 | 15 | 7 | 0.800 | 0.711 | 0.736 | −0.125 | * | ns | |
Tul 12 | 15 | 3 | 0.800 | 0.560 | 0.579 | −0.429 | ns | ns | |
Tul13 | 15 | 3 | 0.600 | 0.647 | 0.669 | 0.072 | ** | ns | |
Tul 16 | 15 | 6 | 0.267 | 0.711 | 0.736 | 0.625 | *** | *** | |
Tul 17 | 15 | 2 | 0.467 | 0.420 | 0.434 | −0.111 | ns | ns | |
Tul 23 | 14 | 5 | 0.071 | 0.717 | 0.743 | 0.900 | *** | *** | |
Tul 24 | 15 | 1 | |||||||
Tul 65 | 15 | 1 | |||||||
Tul TGC6 | 15 | 4 | 0.133 | 0.293 | 0.303 | 0.545 | * | ns | |
Mean | 0.360 | 0.460 | 0.202 | ||||||
GG | Tul 2 | 5 | 2 | 0.200 | 0.180 | 0.200 | −0.111 | ns | ns |
Tul 11 | 5 | 4 | 0.400 | 0.580 | 0.644 | 0.310 | ns | ns | |
Tul 12 | 5 | 2 | 0.800 | 0.480 | 0.533 | −0.667 | ns | ns | |
Tul13 | 5 | 2 | 1.000 | 0.500 | 0.556 | −1.000 | * | ns | |
Tul 16 | 4 | 2 | 1.000 | 0.500 | 0.571 | −1.000 | * | ns | |
Tul 17 | 5 | 2 | 0.200 | 0.180 | 0.200 | −0.111 | ns | ns | |
Tul 23 | 4 | 4 | 0.500 | 0.656 | 0.750 | 0.238 | ns | ns | |
Tul 24 | 5 | 1 | |||||||
Tul 65 | 5 | 2 | 0.200 | 0.180 | 0.200 | −0.111 | ns | ns | |
Tul TGC6 | 5 | 3 | 0.200 | 0.460 | 0.511 | 0.565 | ns | ns | |
Mean | 0.450 | 0.372 | −0.210 | ||||||
GST | Tul 2 | 20 | 4 | 0.650 | 0.681 | 0.699 | 0.046 | *** | *** |
Tul 11 | 20 | 4 | 1.000 | 0.734 | 0.753 | −0.363 | *** | *** | |
Tul 12 | 20 | 4 | 0.850 | 0.746 | 0.765 | −0.139 | *** | *** | |
Tul13 | 18 | 7 | 0.667 | 0.779 | 0.802 | 0.145 | *** | *** | |
Tul 16 | 16 | 9 | 0.438 | 0.863 | 0.891 | 0.493 | ** | ns | |
Tul 17 | 20 | 4 | 0.100 | 0.516 | 0.529 | 0.806 | ** | ns | |
Tul 23 | 13 | 5 | 0.154 | 0.710 | 0.738 | 0.783 | *** | *** | |
Tul 24 | 20 | 2 | 0.050 | 0.469 | 0.481 | 0.893 | *** | *** | |
Tul 65 | 20 | 2 | 0.000 | 0.455 | 0.467 | 1.000 | *** | *** | |
Tul TGC6 | 20 | 6 | 0.400 | 0.630 | 0.646 | 0.365 | *** | *** | |
Mean | 0.431 | 0.658 | 0.403 | ||||||
SH | Tul 2 | 10 | 5 | 0.800 | 0.735 | 0.774 | −0.088 | ns | ns |
Tul 11 | 10 | 6 | 0.800 | 0.775 | 0.816 | −0.032 | ns | ns | |
Tul 12 | 10 | 7 | 0.900 | 0.790 | 0.832 | −0.139 | ns | ns | |
Tul13 | 10 | 3 | 0.500 | 0.395 | 0.416 | −0.266 | ns | ns | |
Tul 16 | 7 | 6 | 0.571 | 0.755 | 0.813 | 0.243 | ns | ns | |
Tul 17 | 10 | 3 | 0.300 | 0.405 | 0.426 | 0.259 | ** | ns | |
Tul 23 | 10 | 3 | 0.200 | 0.545 | 0.574 | 0.633 | ns | ns | |
Tul 24 | 10 | 1 | |||||||
Tul 65 | 10 | 2 | 0.100 | 0.095 | 0.100 | −0.053 | ns | ns | |
Tul TGC6 | 10 | 3 | 0.500 | 0.515 | 0.542 | 0.029 | ns | ns | |
Mean | 0.467 | 0.501 | 0.065 | ||||||
WY | Tul 2 | 17 | 3 | 0.353 | 0.519 | 0.535 | 0.320 | *** | *** |
Tul 11 | 15 | 4 | 0.333 | 0.473 | 0.490 | 0.296 | * | ns | |
Tul 12 | 17 | 4 | 0.471 | 0.678 | 0.699 | 0.306 | ** | ns | |
Tul13 | 17 | 4 | 0.647 | 0.623 | 0.642 | −0.039 | * | ns | |
Tul 16 | 11 | 7 | 0.727 | 0.831 | 0.870 | 0.124 | ** | ns | |
Tul 17 | 17 | 3 | 0.294 | 0.413 | 0.426 | 0.289 | *** | *** | |
Tul 23 | 15 | 4 | 0.067 | 0.624 | 0.646 | 0.893 | *** | *** | |
Tul 24 | 17 | 2 | 0.000 | 0.111 | 0.114 | 1.000 | *** | *** | |
Tul 65 | 16 | 2 | 0.125 | 0.117 | 0.121 | −0.067 | ns | ns | |
Tul TGC6 | 16 | 4 | 0.500 | 0.557 | 0.575 | 0.102 | * | ns | |
Mean | 0.352 | 0.495 | 0.322 |