Figure 2

Phylogenetic analysis of mtORF and mitochondrial genomes. Reanalyzed data from (a) Pinzón et al.²: maximum likelihood and Bayesian (ML/B) phylogenetic analysis of the mtORF alignment of 382 bp. Tip labels indicate mtORF haplotype after Pinzón et al.². (b) Maximum likelihood and Bayesian (ML/B) phylogenetic analysis of pocilloporid mitochondrial genomes (17,884 bp) (bottom). mtORF type designation after Pinzón et al.² and species names after Schmidt-Roach et al.¹¹ (Table 1). Scale bar represents substitutions per site. Pocillopora taxa are in yellow: Pocillopora damicornis; orange: P. acuta; green: P. verrucosa; light blue: P. meandrina; dark blue: P. eydouxi; light purple: P. ligulata; dark purple: P. sp. B. and three outgroups, Stylophora pistillata, Seriatopora caliendrum and Seriatopora hystrix.