Table 2 Clinical isolates analyzed in the study.
From: Discovery of monoclonal antibodies cross-reactive to novel subserotypes of K. pneumoniae O3
Strain | Country of origin | Resistance profilea | MLST | Beta-lactamase | Specimen | PCR | Immunoblot | wbdA sequencing | Serotype | Accession number | K-typec | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Pan-O3 | O3/O3a | O3b | 2F8 | 1G6 | ||||||||||
Kp2 | Hungary | ESBL | ST1915 | nd | urine | + | + | − | + | + | C at position 80 | O3 | SRR5270320 | K60 |
Kp14 | Hungary | ESBL | ST113 | SHV | central venous route | + | + | − | + | + | C at position 80 | O3 | SRR5270322 | K35 |
Kp18 | Hungary | ESBL | ST834 | CTX-M | blood culture | + | − | + | + | − | O3b | SRR5270321 | Non typeable | |
Kp28 | Hungary | ESBL | ST323 | SHV | central venous route | + | − | + | + | − | O3b | SRR5270319 | K51 | |
Kp35 | Poland | ESBL, CR | ST11 | CTX-M-3, SHV-12, KPC-2 | na | + | − | + | + | − | O3b | SRR5270318 | Non typeable | |
Kp49 | Spain | CR | ST54 | VIM-1 | urine | + | − | + | + | − | O3b | nd | ||
Kp62 | Spain | CR | ST384 | KPC-3 | urine | + | + | − | + | + | C at position 80 | O3 | SRR5270317 | K35 |
Kp72 | Spain | ESBL | ST14 | TEM-4 | na | + | − | + | + | − | O3b | nd | ||
Kp77 | Spain | ESBL | ST385 | SHV-12 | urine | + | − | + | + | − | O3b | SRR5270316 | Non typeable | |
Kp81 | Spain | ESBL | ST346 | SHV-12 | wound | + | − | + | + | − | O3b | SRR5270315 | Non typeable | |
Kp82 | Spain | ESBL | ST370 | SHV-12 | wound | + | − | + | + | − | O3b | SRR5270314 | K28 | |
Kp83 | Spain | ESBL | ST346 | SHV-12 | rectal swab | + | − | + | + | − | O3b | nd | ||
Kp100 | Spain | ESBL | ST389 | CTX-M-10 | urine | + | + | - | + | + | C at position 80 | O3 | SRR5270326 | Non typeable |
Kp102 | Spain | ESBL | ST34 | CTX-M-10 | respiratory origin | + | − | + | + | − | O3b | SRR5270325 | K38 | |
Kp103 | Spain | ESBL | ST389 | CTX-M-10 | urine | + | + | − | + | + | C at position 80 | O3 | nd | |
Kp105 | Spain | ESBL | ST16 | CTX-M-15 | urine | + | − | + | + | − | O3b | nd | ||
Kp107 | Spain | ESBL | ST16 | CTX-M-15 | urine | + | − | + | + | − | O3b | SRR5270324 | K51 | |
Kp116 | UAE | CR | ST1798 | OXA-48-like | sputum | + | − | + | − | − | non reactive b | SRR5270323 | K58 | |
Kp184 | UAE | CR | nd | NDM | blood culture | + | + | − | + | + | C at position 80 | O3 | nd | |
Kp236 | UAE | nd | − | blood culture | + | − | + | + | − | O3b | nd | |||
Kp237 | UAE | nd | − | blood culture | + | − | + | + | − | O3b | nd | |||
Kp245 | UAE | nd | − | blood culture | + | − | + | + | − | O3b | nd | |||
Kp257 | UAE | nd | − | blood culture | + | + | − | + | + | C at position 80 | O3 | nd | ||
Kp269 | Israel | CR, ESBL | nd | nd | blood culture | + | − | + | + | − | O3b | nd | ||
Kp292 | Italy | CR, ESBL, colR | ST273 | KPC-3 | na | + | − | + | + | − | O3b | nd | ||
Kp345 | Italy | CR | ST273 | KPC-3 | na | + | − | + | + | − | O3b | nd | ||
LA-KP28 | USA | nd | nd | endotracheal aspirate | + | + | − | + | + | C at position 80 | O3 | nd | ||
LA-KP38 | USA | ESBL | nd | nd | endotracheal aspirate | + | + | − | + | + | C at position 80 | O3 | nd | |
FSJ28 | Germany | ESBL | nd | nd | urine | + | − | + | + | − | O3b | nd | ||
FSJ29 | Germany | ESBL | nd | nd | urine | + | − | + | + | − | O3b | nd | ||
FSJ48 | Germany | ESBL | nd | nd | urine | + | − | + | + | − | O3b | nd | ||
