Table 1 The WRKY genes in P. edulis.
From: Characterization and expression analysis of the WRKY gene family in moso bamboo
ID | WRKY group | Zinc-finger type | |||
|---|---|---|---|---|---|
Conserved heptapeptide | Zinc-finger type | m | n | ||
PheWRKY1-1 | group2b | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY1-2 | group2b | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY2 | group2e | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY3-1 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY3-2 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY4 | group1 | WRKYGQK/WRKYGQK | C2H2 | 4/4 | 22/23 |
PheWRKY5-1 | group2b | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY5-2 | / | WRKYGQK | / | / | / |
PheWRKY7 | group2c | WRKYGKK | C2H2 | 4 | 23 |
PheWRKY8 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY9-1 | group2b | WRKYGQK | C2H2 | 5 | 88 |
PheWRKY9-2 | group2b | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY10 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY11-1 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY11-2 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY11-3 | group2c | WKKYGQK | C2H2 | 4 | 24 |
PheWRKY12 | group2e | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY13-1 | group2e | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY13-2 | group2e | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY13-3 | group2e | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY14 | group2e | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY15-1 | group3 | WRKYGQK | C2HC | 7 | 23 |
PheWRKY15-2 | group3 | WRKYGQK | C2HC | 7 | 23 |
PheWRKY16 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY17-1 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY17-2 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY17-3 | / | WRKYGQK | / | / | / |
PheWRKY19-1 | group3 | WRKYGQK | C2HC | 7 | 23 |
PheWRKY19-2 | group3 | WRKYGQK | C2HC | 7 | 23 |
PheWRKY19-3 | group3 | WRKYGQK | C2HC | 7 | 23 |
PheWRKY21 | group3 | WRKYGQK | C2HC | 6 | 23 |
PheWRKY22-1 | group3 | WRKYGQK | C2HC | 7 | 24 |
PheWRKY22-2 | group3 | WRKYGQK | C2HC | 7 | 24 |
PheWRKY24-1 | group1 | WRKYGQK/WRKYGQK | C2H2 | 4/4 | 22/23 |
PheWRKY24-2 | group1 | WRKYGQK/WRKYGQK | C2H2 | 4/4 | 22/23 |
PheWRKY25 | / | / | C2H2 | 4 | 23 |
PheWRKY26-1 | group2c | WRKYGKK | C2H2 | 4 | 23 |
PheWRKY26-2 | group2c | WRKYGKK | C2H2 | 4 | 23 |
PheWRKY28 | group2a | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY29-1 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY29-2 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY29-3 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY29-4 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY34-1 | / | WRKYGQK | / | / | / |
PheWRKY34-2 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY35-1 | group1 | WRKYGQK/WRKYGQK | C2H2 | 4/4 | 22/23 |
PheWRKY35-2* | group1 | WRKYGQK/WRKYGQK | C2H2 | 4 | 22 |
PheWRKY36 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY39-1 | group2e | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY39-2 | group2e | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY39-3 | group2e | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY42 | group2d | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY43 | group2b | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY44 | group3 | WRKYGQK | C2HC | 7 | 23 |
PheWRKY45-1 | group3 | WRKYGQK | C2HC | 7 | 23 |
PheWRKY45-2 | / | / | C2HC | 7 | 23 |
PheWRKY46-1 | group3 | WRKYGEK | C2HC | 7 | 23 |
PheWRKY46-2 | group3 | WRKYGEK | C2HC | 7 | 24 |
PheWRKY48-1 | group3 | WRKYGQK | C2HC | 7 | 23 |
PheWRKY48-2 | group3 | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY49 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY51-2 | group2d | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY51-1 | group2d | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY65-1 | group3 | WRKYGQK | C2HC | 7 | 29 |
PheWRKY65-2 | group3 | WRKYGQK | C2HC | 7 | 30 |
PheWRKY53-1 | group1 | WRKYGQK/WRKYGQK | C2H2 | 4/4 | 23/23 |
PheWRKY53-2 | group1 | WRKYGQK/WRKYGQK | C2H2 | 4/4 | 23/23 |
PheWRKY55 | group3 | WRKYGEK | C2HC | 7 | 24 |
PheWRKY62 | group2a | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY66 | group2e | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY67-1 | group2c | WRKYGKK | C2H2 | 4 | 23 |
PheWRKY67-2 | group2c | WRKYGKK | C2H2 | 4 | 23 |
PheWRKY68-1 | group2d | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY68-2 | / | WRKYGQK | / | / | / |
PheWRKY69-1 | group3 | WRKYGQK | C2HC | 7 | 23 |
PheWRKY69-2 | group3 | WRKYGQK | C2HC | 7 | 23 |
PheWRKY70-1 | group1 | WRKYGQK/WRKYGQK | C2H2 | 4/4 | 22/23 |
PheWRKY70-2 | group1 | WRKYGQK/WRKYGQK | C2H2 | 4/4 | 22/23 |
PheWRKY71-1 | group2a | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY71-2 | group2a | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY72-1 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY72-2 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY72-3 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY73-1 | group2b | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY73-2 | group2b | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY74-1 | group3 | WRKYGQK | C2HC | 7 | 23 |
PheWRKY74-2 | group3 | WRKYGKK | C2H2 | 7 | 23 |
PheWRKY75 | group3 | WRKYGQK | C2HC | 7 | 23 |
PheWRKY76 | group2a | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY77-1 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY77-2 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY78 | group1 | WRKYGQK/WRKYGQK | C2H2 | 4/4 | 22/23 |
PheWRKY79-2 | / | WRKYGQK | / | / | / |
PheWRKY79-1 | / | WRKYGQK | / | / | / |
PheWRKY80-1 | group1 | CRKYGQA/WRKYGQK | C2H2 | 4/4 | 23/22 |
PheWRKY80-2 | group1 | WRKYGQQ/WRKYGQK | C2H2 | 4/4 | 22/23 |
PheWRKY80-3 | group1 | WRKYGQK/WRKYGQK | C2H2 | 4/4 | 22/23 |
PheWRKY82 | group1 | WRKYGQK/WRKYGQK | C2H2 | 4/4 | 22/23 |
PheWRKY83-1 | group2d | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY83-2 | / | WRKYGQK | / | / | / |
PheWRKY83-3 | group2d | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY85-1* | group1 | WRKYGQK/WRKYGQK | C2H2 | 4 | 22 |
PheWRKY85-2 | group1 | WRKYGQK/WRKYGQK | C2H2 | 4/4 | 22/22 |
PheWRKY88-1 | group2e | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY88-2 | / | / | C2H2 | 5 | 23 |
PheWRKY89 | group2d | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY93 | group3 | WRKYGQK | C2HC | 7 | 23 |
PheWRKY95 | / | WRKYGQK | / | / | / |
PheWRKY96-1* | group1 | WRKYGQK/WRKYGQK | C2H2 | 4 | 22 |
PheWRKY96-2* | group1 | WRKYGQK/WRKYGQK | C2H2 | 4 | 22 |
PheWRKY96-3* | group1 | WRKYGQK/WRKYGQK | C2H2 | 4 | 22 |
PheWRKY97-1 | group2b | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY97-2 | group2b | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY100 | group3 | WRKYGQK | C2HC | 7 | 27 |
PheWRK109 | group2b | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY111 | group2e | WRKYGQK | C2H2 | 5 | 23 |
PheWRKY114-1 | group3 | WRKYGEK | C2HC | 7 | 24 |
PheWRKY114-2 | group3 | WRKYGEK | C2HC | 7 | 23 |
PheWRKY116 | group3 | WRKYGQK | C2HC | 7 | 24 |
PheWRKY119 | group2c | WRKYGQK | C2H2 | 4 | 23 |
PheWRKY125 | group1 | WRKYGQK/WRKFGQK | C2HC | 4/4 | 23/23 |
