Table 3 Databases used for mapping SAGE tags in transcriptome analysis.
SAGE tags from | Reference transcriptomes used for mapping (Designation) | Source |
|---|---|---|
Chickpea | Cicer arietinum L (CA) | NCBI (Release 197; Aug 2013) |
Medicago truncatula (MT) | Ensembl Plants (Database version 87.2; September 2013) | |
Glycine max (GM) | NCBI (Release 197; Aug 2013) | |
Cajanus cajan (CC) | NCBI (Release 197; Aug 2013) | |
Lotus japonicus (LJ) | NCBI (Release 197; Aug 2013) | |
Fusarium oxysporum | Fusarium oxysporum (FO) | Ensembl Fungi (Database version is 87.2; Sept 2013) |
Fusarium graminearum (FG) | Broad Institute (March 2007) |
