Scientific Reports

Table 1 Potential Livestock associated MRSA strains and associated data.

From: Genomic surveillance reveals low prevalence of livestock-associated methicillin-resistant Staphylococcus aureus in the East of England

Isolate name	Sequence type	Clonal complex	Date	Source	Location^a	Vitek antibiogram^b	Resistance genes	Virulence genes	ERR accession	LA-MRSA
CBLA1 ^c	97	97	01/13	Screen swab	GP	PEN, FOX, OXA	blaZ, mecA, cadD	scn, sak	ERR715294	No
CBLA2 ^c	97	97	01/13	Screen swab	HOS	PEN, FOX, OXA	blaZ, mecA, cadD	scn, sak	ERR737075	No
CBLA3	1945	130	08/12	Screen swab	HOS	PEN, FOX	blaZ _LGA251 , mecC, arsB, arsC	scn, sak, edin-B, etd2	ERR701929	Yes
CBLA4	1245	130	09/12	Screen swab	HOS	PEN, FOX	blaZ _LGA251 , mecC, arsB, arsC	edin-B, etd2	ERR714935	Yes
CBLA5	CC130	130	02/13	Screen swab	HOS	PEN, FOX	blaZ _LGA251 , mecC, arsB, arsC, cadD	edin-B, etd2	ERR737232	Yes
CBLA6	1245	130	03/13	SSTI	HOS	PEN, FOX, ERY	msrA, smr (qacC), blaZ _LGA251 , mecC, arsB, arsC	edin-B, etd2	ERR737543	Yes
CBLA7	130	130	03/13	Screen swab	HOS	PEN, FOX	blaZ _LGA251 , mecC, arsB, arsC	edin-B, etd2	ERR737555	Yes
CBLA8 ^d	1245	130	06/12	Screen swab	GP	PEN, FOX	blaZ _LGA251 , mecC, arsB, arsC	edin-B, etd2	ERR737640	Yes
CBLA9	2574	130	05/12	SSTI	GP	PEN, FOX	blaZ _LGA251 , mecC, arsB, arsC	edin-B, etd2	ERR204178	Yes
CBLA10 ^d	1245	130	05/12	Screen swab	HOS	PEN, FOX	blaZ _LGA251 , mecC, arsB, arsC	edin-B, etd2	ERR211963	Yes
CBLA11	1245	130	06/12	Screen swab	HOS	PEN, FOX	blaZ _LGA251 , mecC, arsB, arsC	edin-B, etd2	ERR212880	Yes
CBLA12	1245	130	06/12	Screen swab	HOS	PEN, FOX, OXA	blaZ _LGA251 , mecC, arsB, arsC	edin-B, etd2	ERR212993	Yes
CBLA13	398	398	04/13	Screen swab	HOS	PEN, FOX, OXA, ERY, TET, CLI	blaZ, mecA, ermC, tetM, tetK,	vwb (SaPI encoded)	ERR715120	Yes
CBLA14	425	425	01/13	Screen swab	HOS	PEN, FOX,	blaZ _LGA251 , mecC, arsB, arsC, cadD		ERR737103	Yes
CBLA15	1943	1943	03/13	SSTI	GP	PEN, FOX	blaZ _LGA251 , mecC, arsB, arsC, cadD	tst (SaPIbov), seg, sei	ERR737480	Yes

^aLocation: HOS = Hospital, GP = General practitioner. ^bVitek antibiogram: Three letter codes indicate resistance to: PEN = Benzlpenicillin, FOX = Cefoxitin, OXA = Oxacillin, FUS = Fusidic acid, ERY = Erythromycin, TET = Tetracycline, CLI = Clindamycin. Bold text - ^cdenotes that CBLA1 and CBLA2 were isolated from the same patient. ^ddenotes that CBLA8 and CBLA10 were isolated from the same patient. SSTI = skin and soft tissue infection.

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