Table 1 Summary of sequencing data generated and mapped on A and B subgenomes of groundnut.
Library information | Total reads (millions) | High quality reads (millions, >Q30 filtered) | High quality singletons (millions, >Q30 filtered) | Number of reads (millions) uniquely mapped on A subgenome | Number of reads (millions) uniquely mapped on B subgenome |
|---|---|---|---|---|---|
J 11_Control_1DAI | 100.20 | 79.69 | 6.02 | 63.17 | 63.50 |
J 11_Control_2DAI | 90.06 | 71.10 | 5.59 | 52.88 | 53.06 |
J 11_Control_3DAI | 88.01 | 69.53 | 5.45 | 51.97 | 52.19 |
J 11_Control_7DAI | 90.68 | 67.66 | 6.76 | 42.72 | 47.02 |
J 11_Infected_1DAI | 73.82 | 57.92 | 4.69 | 43.00 | 44.37 |
J 11_Infected_2DAI | 77.79 | 56.41 | 6.35 | 28.15 | 32.68 |
J 11_Infected_3DAI | 75.07 | 60.19 | 4.49 | 41.01 | 42.59 |
J 11_Infected_7DAI | 75.02 | 59.07 | 4.80 | 38.00 | 40.55 |
JL 24_Control_1DAI | 85.28 | 72.09 | 5.36 | 51.74 | 54.27 |
JL 24_Control_2DAI | 89.96 | 73.30 | 4.92 | 55.72 | 56.53 |
JL 24_Control_3DAI | 89.73 | 70.04 | 4.99 | 50.50 | 51.52 |
JL 24_Control_7DAI | 86.77 | 67.54 | 5.35 | 43.72 | 47.48 |
JL 24_Infected_1DAI | 85.61 | 67.05 | 5.59 | 44.12 | 47.64 |
JL 24_Infected_2DAI | 89.88 | 75.60 | 4.77 | 47.06 | 51.05 |
JL 24_Infected_3DAI | 69.52 | 56.68 | 3.86 | 43.47 | 43.42 |
JL 24_Infected_7DAI | 76.62 | 60.33 | 4.89 | 40.53 | 42.96 |
Total | 1344.04 | 1064.21 | 83.88 | 737.75 | 770.84 |
