Table 2 Distribution of SNPs in differentially expressed genes across A and B subgenomes of groundnut.
SNP categories | A subgenome | B subgenome | Total |
|---|---|---|---|
Non-synonymous coding | 20 | 42 | 62 |
Synonymous coding | 18 | 33 | 51 |
Intron | 4 | 19 | 23 |
UTR_3 prime | 2 | 10 | 12 |
UTR_5 prime | 2 | 9 | 11 |
Others | 3 | 2 | 5 |
Stop_gained | 0 | 2 | 2 |
Frame shift | 1 | 0 | 1 |
Stop_lost | 0 | 1 | 1 |
Total | 50 | 118 | 168 |
