Figure 11
From: De novo transcriptome assembly for the spiny mouse (Acomys cahirinus)
Diamond BLASTx hits from the UniRef90 database. SOAPdenovo-Trans (1): no filtering; (2): light filtering of poor quality read pairs, combined with in silico normalization; (3): moderate filtering of poor quality read pairs; Trinity (1): light filtering of poor quality read pairs, combined with in silico normalization; (2): moderate filtering of poor quality read pairs; (3): light filtering of poor quality read pairs, combined with SEECER error correction; (4) Trinity v2.3.2 after moderate filtering of poor quality read pairs; Velvet/Oases (1): moderate filtering of poor quality read pairs; Velvet/Oases (2): moderate filtering of poor quality read pairs combined with in silico normalization.
