Table 2 The identified candidate genes involved in ROS scavenging system in response to Cd exposure in pak choi.
Unigene ID | Gene Description | Gene name | log2 Readcount ratio | p-adjusted | ||||
|---|---|---|---|---|---|---|---|---|
BCd10/BCd0 | KCd10/KCd0 | KCd10/BCd10 | BCd10 vs. BCd0 | KCd10 vs. KCd0 | KCd10 vs. BCd10 | |||
c111359_g4 | ADP/ATP translocase 1 | AAT1 | 5.865347 | −14.946 | −5.82635 | 1 | 4.7274E-39 | 1 |
c111777_g1 | Fe superoxide dismutase 1, Fe-Mn family | Fe-SOD1 | 1.194788 | 1.42877 | 1.163955 | 0.083021 | 3.4508E-06 | 5.0409E-08 |
c111722_g2 | superoxide dismutase, Cu-Zn family | Cu/Zn-SOD | 4.104719 | 2.9075 | −1.20676 | 0.01282 | 0.94658 | 1 |
c111722_g1 | superoxide dismutase, Cu-Zn family | Cu/Zn-SOD | 0.002702 | −1.6693 | −1.04001 | 1 | 0.0052312 | 0.13019 |
c105537_g2 | ferric reduction oxidase 2 | FRO2 | 1.685025 | −1.5766 | −4.14407 | 8.9402E-08 | 0.024364 | 3.93E-47 |
c63214_g2 | ferritin-3 | FER3 | 5.865347 | −13.365 | −5.82635 | 1 | 8.2288E-12 | 1 |
c63214_g1 | ferritin-3 | FER3 | 0 | −12.659 | 0 | NA | 4.1182E-08 | NA |
c82210_g1 | glutathione gamma-glutamylcysteinyltransferase | GGGT | 0 | −13.565 | 0 | NA | 0.0073943 | NA |
c95296_g2 | glutathione peroxidase | GPX | 0 | −11.086 | 0 | NA | 0.0054784 | NA |
c97139_g1 | glutathione S-transferase | GST | 0 | −13.771 | 0 | NA | 0.0097912 | NA |
c71792_g1 | glutathione S-transferase 3 | GST3 | 0 | −13.781 | 0 | NA | 0.040538 | NA |
c98684_g1 | glutathione S-transferase isoform 1 | GST1 | 3.084974 | 11.1703 | −0.64776 | 0.015764 | 0.005515 | 1 |
c42503_g1 | L-ascorbate peroxidase | APX | 0 | −13.942 | 0 | NA | 1.4913E-05 | NA |
c103054_g1 | monothiol glutaredoxin | GRX | 0 | −12.597 | 0 | NA | 0.017912 | NA |
c72868_g1 | nucleoside-diphosphate kinase | NDPK | 5.535616 | −14.701 | −5.49449 | 1 | 0.019301 | 1 |
c105890_g1 | peroxidase 44-like | POD 44 | 1.118188 | 0.32902 | −1.34271 | 0.023056 | 1 | 0.00079376 |
c97892_g1 | peroxidase 54 | POD 54 | 1.026703 | 0.46609 | −0.72778 | 0.020677 | 1 | 0.041487 |
c78850_g1 | peroxidase 62 | POD 62 | 1.588517 | 1.36876 | −1.24846 | 7.8659E-07 | 1 | 0.022465 |
c97892_g2 | peroxidase A2 | POD A2 | 1.342933 | 0.65313 | −1.48458 | 0.04055 | 1 | 0.00010904 |
c235353_g1 | peroxiredoxin | PrxR | 11.37772 | 0.0656 | −0.35207 | 0.00034539 | 1 | 1 |
c59041_g1 | thioredoxin domain-containing protein PLP3B | PLP3B | 0 | −13.808 | 0 | NA | 0.027499 | NA |
c166028_g1 | protein disulfide isomerase family A, member 3 | PDI | 10.9317 | −0.1886 | −0.16004 | 0.010017 | 1 | 1 |
c104421_g2 | thioredoxin-like 1-1 | Trx1-1 | −1.11759 | −0.3378 | 0.550077 | 0.0022104 | 1 | 0.27375 |
c102953_g3 | thioredoxin reductase 2 | TrxR2 | −0.88796 | −12.814 | −7.07945 | 1 | 0.014115 | 1 |
c104854_g1 | NADPH-dependent thioredoxin reductase | TrxR | −16.3511 | 0 | 0 | 3.8393E-79 | NA | NA |
