Table 3 Preferred abundance of proteins during irrigation with transfer water. Optimal amounts (TW-C) and regulated deficit irrigation during summer (TW-RDI) are indicated.
Function | Accession | Aug'14 | Jan'15 | Jun'15 | Organism(s) |
|---|---|---|---|---|---|
ABC-type sugar transport system, periplasmic component | COG1653 | TW-RDI | TW-RDI | TW-RDI | Acidithrix, Azospirillum, Moorella, Pyrinomonas, Sediminibacterium |
Acetyl-CoA acetyltransferase | COG0183 | TW-RDI | TW-RDI | TW-RDI | Segetibacter |
Aconitase A | COG1048 | TW-RDI | TW-RDI | TW-RDI | Gemmatirosa, Pseudoxanthomonas, Solirubrobacter, Terrimonas, Zavarzinella |
Adenylylsulfate kinase and related kinases | COG0529 | TW-RDI | TW-RDI | TW-RDI | Rubrobacter, Sorangium |
Bacterial nucleoid DNA-binding protein | COG0776 | TW-RDI | TW-RDI | TW-RDI | Niastella, Rubrobacter, Sorangium |
Dihydroxyacid dehydratase/phosphogluconate dehydratase | COG0129 | TW-RDI | TW-RDI | TW-RDI | Zavarzinella |
Glutamine synthetase | COG0174 | TW-RDI | TW-RDI | TW-RDI | Janthinobacterium, Promicromonospora, Pseudoxanthomonas, Segetibacter, Solirubrobacter, Vulgatibacter |
Microcystin-dependent protein | COG4675 | TW-RDI | TW-RDI | TW-RDI | Acidithrix, Pedobacter |
Mn-containing catalase | COG3546 | TW-RDI | TW-RDI | TW-RDI | Ilumatobacter, Pedobacter, Promicromonospora, Rubrobacter, Solirubrobacter, Zavarzinella |
Opacity protein and related surface antigens | COG3637 | TW-RDI | TW-RDI | TW-RDI | Janthinobacterium, Pseudoxanthomonas, Thermoanaerobaculum |
S-adenosylhomocysteine hydrolase | COG0499 | TW-RDI | TW-RDI | TW-RDI | Aeromicrobium, Janthinobacterium, Pedobacter, Sorangium, Thermoanaerobaculum, Vulgatibacter |
Malate/lactate dehydrogenases | COG0039 | TW-RDI | TW-RDI | Caenimonas, Janthinobacterium, Sorangium | |
Peroxiredoxin | COG1225 | TW-RDI | TW-RDI | Rubrobacter, Sorangium, Vulgatibacter, Zavarzinella | |
TRAP-type mannitol/chloroaromatic compound transport system | COG4663 | TW-RDI | Acidithrix | ||
ABC-type amino acid transport/signal transduction systems | COG0834 | TW-RDI | TW-RDI | Jiangella, Pseudoxanthomonas | |
ABC-type branched-chain amino acid transport systems, periplasmic component | COG0683 | TW-RDI | TW-RDI | Niastella | |
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components | COG0715 | TW-RDI | TW-RDI | Deferrisoma, Pseudoxanthomonas | |
ABC-type oligopeptide transport system, periplasmic component | COG4166 | TW-RDI | TW-RDI | Rubrobacter | |
Anaerobic dehydrogenases, typically selenocysteine-containing | COG0243 | TW-RDI | TW-RDI | Arenimonas, Pyrinomonas | |
Catalase | COG0753 | TW-RDI | TW-RDI | Promicromonospora, Thermobaculum | |
Dienelactone hydrolase and related enzymes | COG0412 | TW-RDI | TW-RDI | Vulgatibacter | |
Enoyl-[acyl-carrier-protein] reductase (NADH) | COG0623 | TW-RDI | TW-RDI | Caenimonas | |
Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase | COG0057 | TW-RDI | TW-RDI | Pedobacter, Pseudoxanthomonas, Rubrobacter, Sorangium, Vulgatibacter | |
Monomeric isocitrate dehydrogenase | COG2838 | TW-RDI | TW-RDI | Altibacter, Jiangella, Segetibacter | |
Nucleoside diphosphate kinase | COG0105 | TW-RDI | TW-RDI | Brevundimonas | |
RecA/RadA recombinase | COG0468 | TW-RDI | TW-RDI | Pseudoxanthomonas, Vulgatibacter | |
TRAP-type C4-dicarboxylate transport system, periplasmic component | COG1638 | TW-RDI | TW-RDI | Aureimonas, Niastella, Pedobacter | |
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases | COG0737 | TW-RDI | Solirubrobacter | ||
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs | COG1529 | TW-RDI | Pyrinomonas | ||
Aspartate-semialdehyde dehydrogenase | COG0136 | TW-RDI | Ramlibacter | ||
Carbon dioxide concentrating mechanism/carboxysome shell protein | COG4577 | TW-RDI | Ramlibacter | ||
Glutaminase | COG2066 | TW-RDI | Sorangium | ||
Threonine dehydrogenase and related Zn-dependent dehydrogenases | COG1063 | TW-RDI | Niastella | ||
Glucose/sorbosone dehydrogenases | COG2133 | TW-RDI | Gemmatirosa | ||
MoxR-like ATPases | COG0714 | TW-RDI | Acidithrix | ||
3-hydroxyacyl-CoA dehydrogenase | COG1250 | TW-C | TW-C | TW-C | Altibacter, Pseudoxanthomonas, Solirubrobacter, Vulgatibacter |
ABC-type amino acid transport/signal transduction systems | COG0834 | TW-C | TW-C | TW-C | Pseudoxanthomonas, Terrimonas |
ABC-type sugar transport system, periplasmic component | COG1653 | TW-C | TW-C | TW-C | Rhodopirellula, Rubrobacter, Pedobacter, Pyrinomonas, Sediminibacterium |
Aconitase A | COG1048 | TW-C | TW-C | TW-C | Gemmatimonas, Pedobacter, Solirubrobacter, Sorangium, Zavarzinella |
Glutamine synthetase | COG0174 | TW-C | TW-C | TW-C | Janthinobacterium, Pedobacter, Promicromonospora, Thermoanaerobaculum, Solirubrobacter |
Malate/lactate dehydrogenases | COG0039 | TW-C | TW-C | TW-C | Janthinobacterium, Pseudoxanthomonas, Sorangium, Sphaerobacter, Vulgatibacter |
RecA/RadA recombinase | COG0468 | TW-C | TW-C | TW-C | Arenimonas, Pseudoxanthomonas, Vulgatibacter, Zavarzinella |
Ribulose 1,5-bisphosphate carboxylase, large subunit | COG1850 | TW-C | TW-C | TW-C | Rubrobacter |
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases | COG0737 | TW-C | TW-C | Pseudoxanthomonas, Solirubrobacter, Zavarzinella | |
Bacterial nucleoid DNA-binding protein | COG0776 | TW-C | TW-C | Brevundimonas, Rubrobacter, Sorangium, Vulgatibacter | |
Isocitrate dehydrogenases | COG0538 | TW-C | TW-C | Pyrinomonas, Vulgatibacter, Zavarzinella | |
Superoxide dismutase | COG0605 | TW-C | TW-C | Pyrinomonas | |
Microcystin-dependent protein | COG4675 | TW-C | TW-C | Acidithrix | |
Nucleoside diphosphate kinase | COG0105 | TW-C | Solirubrobacter | ||
Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family | COG0652 | TW-C | Pseudoxanthomonas | ||
ABC-type branched-chain amino acid transport systems, periplasmic component | COG0683 | TW-C | TW-C | Flavobacterium, Sorangium | |
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components | COG0715 | TW-C | TW-C | Janthinobacterium, Sorangium, Sphaerobacter, Vulgatibacter | |
Arylsulfatase A and related enzymes | COG3119 | TW-C | TW-C | Niastella, Rubrobacter | |
Glutaminase | COG2066 | TW-C | TW-C | Janthinobacterium | |
Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase | COG0057 | TW-C | TW-C | Pseudoxanthomonas, Pyrinomonas, Sediminibacterium, Vulgatibacter | |
Catalase | COG0753 | TW-C | Niastella, Ramlibacter, Solimonas | ||
Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) | COG0580 | TW-C | Promicromonospora, Sphaerobacter | ||
L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily | COG4948 | TW-C | Sphingomonas | ||
Peroxiredoxin | COG1225 | TW-C | Azospirillum, Caenimonas, Sorangium, Vulgatibacter | ||
ABC-type dipeptide transport system, periplasmic component | COG0747 | TW-C | Haliangium | ||
Aspartate-semialdehyde dehydrogenase | COG0136 | TW-C | Ramlibacter | ||
Carbon dioxide concentrating mechanism/carboxysome shell protein | COG4577 | TW-C | Ramlibacter | ||
Cbb3-type cytochrome oxidase, cytochrome c subunit | COG2993 | TW-C | Pseudoxanthomonas | ||
Mn-containing catalase | COG3546 | TW-C | Niabella, Zavarzinella | ||
MoxR-like ATPases | COG0714 | TW-C | Ramlibacter, Sorangium | ||
TRAP-type C4-dicarboxylate transport system, periplasmic component | COG1638 | TW-C | Ramlibacter, Rubrobacter |
