Table 4 Preferred abundance of proteins during irrigation with reclaimed water. Optimal amounts (RW-C) and regulated deficit irrigation during summer (RW-RDI) are indicated.

From: Ecological and functional adaptations to water management in a semiarid agroecosystem: a soil metaproteomics approach

Function

Accession

Aug'14

Jan'15

Jun'15

Organism(s)

Catalase

COG0753

RW-RDI

 

RW-RDI

Promicromonospora, Ramlibacter

Opacity protein and related surface antigens

COG3637

RW-RDI

 

RW-RDI

Azospirillum, Pseudoxanthomonas

Microcystin-dependent protein

COG4675

RW-RDI

 

RW-RDI

Pedobacter, Ramlibacter

5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases

COG0737

RW-RDI

 

RW-RDI

Pseudoxanthomonas

Mn-containing catalase

COG3546

  

RW-RDI

Ramlibacter

Glutaminase

COG2066

RW-RDI

RW-RDI

 

Vulgatibacter

ABC-type oligopeptide transport system, periplasmic component

COG4166

RW-RDI

RW-RDI

 

Pedobacter

Aconitase A

COG1048

RW-RDI

RW-RDI

 

Brevundimonas, Vulgatibacter

L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily

COG4948

RW-RDI

  

Altibacter

S-adenosylhomocysteine hydrolase

COG0499

RW-RDI

  

Janthinobacterium

Bacterial nucleoid DNA-binding protein

COG0776

RW-RDI

  

Altibacter

3-hydroxyacyl-CoA dehydrogenase

COG1250

RW-RDI

  

Pedobacter

Glutamine synthetase

COG0174

RW-RDI

  

Labilithrix

TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

COG4663

RW-RDI

  

Aureimonas, Jiangella

Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

COG0057

RW-RDI

  

Pseudoxanthomonas

MoxR-like ATPases

COG0714

RW-RDI

  

Sediminibacterium

Acetoacetate decarboxylase

COG4689

RW-RDI

  

Caenimonas

TRAP-type C4-dicarboxylate transport system, periplasmic component

COG1638

RW-RDI

  

Aureimonas

Ribulose 1,5-bisphosphate carboxylase, large subunit

COG1850

RW-RDI

  

Rubrobacter, Zavarzinella

Arylsulfatase A and related enzymes

COG3119

RW-RDI

  

Pedobacter, Rubrobacter

Isocitrate dehydrogenases

COG0538

RW-RDI

  

Zavarzinella

Superoxide dismutase

COG0605

RW-RDI

  

Pyrinomonas, Rubrobacter

Peroxiredoxin

COG1225

RW-RDI

  

Vulgatibacter

ABC-type sugar transport system, periplasmic component

COG1879

RW-RDI

  

Acidithrix, Moorella, Sphingomonas

Malate/lactate dehydrogenases

COG0039

RW-RDI

  

Pyrinomonas, Sorangium

ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

COG0715

RW-RDI

  

Pseudoxanthomonas, Sorangium, Zavarzinella

Bacterial nucleoid DNA-binding protein

COG0776

RW-C

RW-C

RW-C

Flavobacterium, Pseudoxanthomonas

Dihydroxyacid dehydratase/phosphogluconate dehydratase

COG0129

RW-C

RW-C

RW-C

Acidithrix

Mn-containing catalase

COG3546

RW-C

RW-C

RW-C

Ilumatobacter, Niabella

ABC-type dipeptide transport system, periplasmic component

COG0747

 

RW-C

RW-C

Sorangium

Microcystin-dependent protein

COG4675

 

RW-C

RW-C

Ramlibacter

MoxR-like ATPases

COG0714

 

RW-C

RW-C

Niastella, Sorangium

S-adenosylhomocysteine hydrolase

COG0499

 

RW-C

RW-C

Zavarzinella

Superoxide dismutase

COG0605

 

RW-C

RW-C

Pyrinomonas, Rubrobacter

Acetyl-CoA acetyltransferase

COG0183

RW-C

 

RW-C

Promicromonospora

Opacity protein and related surface antigens

COG3637

RW-C

 

RW-C

Jiangella, Pseudoxanthomonas

Histone H4

KOG3467

  

RW-C

Aureimonas

TRAP-type C4-dicarboxylate transport system, periplasmic component

COG1638

  

RW-C

Vulgatibacter

Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

COG0057

RW-C

RW-C

 

Sorangium, Vulgatibacter

Arylsulfatase A and related enzymes

COG3119

RW-C

RW-C

 

Niastella

Aconitase A

COG1048

RW-C

RW-C

 

Sorangium, Streptomyces, Terrimonas

ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

COG0715

 

RW-C

 

Janthinobacterium

ABC-type sugar transport system, periplasmic component

COG1653

 

RW-C

 

Azospirillum

Anaerobic dehydrogenases, typically selenocysteine-containing

COG0243

 

RW-C

 

Pyrinomonas

Enoyl-[acyl-carrier-protein] reductase (NADH)

COG0623

 

RW-C

 

Caenimonas

Glutaminase

COG2066

 

RW-C

 

Sorangium

Glutamine synthetase

COG0174

 

RW-C

 

Promicromonospora

Ribosome recycling factor

COG0233

 

RW-C

 

Segetibacter

Ribulose 1,5-bisphosphate carboxylase, large subunit

COG1850

 

RW-C

 

Novosphingobium

3-hydroxyacyl-CoA dehydrogenase

COG1250

RW-C

  

Vulgatibacter

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