Table 1 Summary of S. miltiorrhiza transcriptome.
| Â | Control | MeJA-1h | MeJA-6h | YE-1h | YE-12h | All Unigene |
|---|---|---|---|---|---|---|
Raw Reads | 37866226 | 42574704 | 42514138 | 49822250 | 54383514 | — |
Clean Reads | 27364554 | 32801610 | 32161100 | 38973026 | 41483248 | — |
Number of contigs | 46354 | 48181 | 44857 | 51660 | 46708 | 55588 |
Number of characters | 40707368 | 40872184 | 39108985 | 45165688 | 44225189 | 71821817 |
Maximum contig length(bp) | 11988 | 12449 | 12002 | 10940 | 12280 | 12449 |
Minimum contig length(bp) | 201 | 201 | 201 | 201 | 201 | 300 |
Median contig length(bp) | 589 | 558 | 580 | 588 | 646 | 1022 |
Average contig length(bp) | 878.18 | 848.31 | 871.86 | 874.29 | 946.84 | 1292.04 |
Contig N50 length(bp) | 1340 | 1304 | 1338 | 1348 | 1461 | 1772 |
GC% content after filtering (%) | 49 | 49 | 49 | 49 | 49 | 49 |
Reads mapping to All-Unigene (%) | 97.61 | 97.68 | 97.95 | 97.44 | 97.81 | — |
