Table 1 Benchmarks for FunctionAnnotator performance.
From: FunctionAnnotator, a versatile and efficient web tool for non-model organism annotation
Organism(s) | # of contigs | Total bp | # of contigs with best hit (%) | # of contigs annotated* (%) | Elapsed Time |
|---|---|---|---|---|---|
Clam | 101,795 | 38,886,727 | 29,960 (29%) | 35,971 (64%) | 7 h 20 m 38 s |
Metatranscriptome I | 241 | 85,193 | 225 (93%) | 126 (64%) | 24 m 47 s |
Metatranscriptome II | 381 | 137,588 | 367 (96%) | 243 (76%) | 29 m 57 s |
Trichomonas | 19,415 | 24,204,403 | 16,866 (87%) | 13,497 (70%) | 3 h 26 m 56 s |
