Table 1 Characteristics distribution of different types of reads (raw, filtered and mapped) obtained in Illumina sequencing.
Samples | Total raw reads | Total filtered reads | % of filtered reads | Total mapped reads | % of mapped reads | Multiple mapped reads | % of multiple mapped reads |
|---|---|---|---|---|---|---|---|
LV | 21154108 | 17055744 | 80.63 | 14740654 | 86.43 | 69521 | 0.4 |
LB | 17908854 | 14299157 | 79.84 | 12746727 | 89.14 | 62209 | 0.4 |
LF | 21234036 | 17610069 | 82.93 | 15069021 | 85.57 | 81620 | 0.5 |
B | 22711170 | 18300946 | 80.58 | 15926339 | 85.21 | 77548 | 0.5 |
F | 18592680 | 15027649 | 80.83 | 13189957 | 87.77 | 63830 | 0.4 |
Total | 101600848 | 82293565 | 80.96 | 71340904 | 86.82 | 354728 | 0.4 |
