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Figure 1

From: Whole genome sequencing-based association study to unravel genetic architecture of cooked grain width and length traits in rice

Figure 1

SNP-based GWAS for grain width (GWi) that confirmed GW5 and identified prominent candidate loci on chromosomes 7 and 11. Manhattan plots of the genome-wide association studies on GWi for japonica (A), indica (B) and all (C, combined) panels (left side) for raw grain; Japonica (D), indica (E) and all (F, combined) for cooked grain (right side). The novel genomic regions in chromosomes 7 (GWi7.1, GWi7.2, GWic7.1, GWic7.2) and 11 (GWi11.1) were detected along with previously characterized/cloned gene in chromosome 5 (GW5). Horizontal red and blue line represents the genome-wide significant threshold −log10(P) value of 7 and 5, respectively.

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