Figure 7 | Scientific Reports

Figure 7

From: Whole genome sequencing-based association study to unravel genetic architecture of cooked grain width and length traits in rice

Figure 7

Targeted-gene association study (TGAS) in hotspot region of Chr7 (GWi7) commonly detected in single-and multi-locus GWAS identified a total of five genes that had significant association with GWi and GWic. (A) LOC_Os07g37820 was identified as key gene in GWi7.1 region. Three additional genes (B) LOC_Os07g38980, (D) LOC_Os07g41000 and (E) LOC_Os07g41080 were identified through TGAS in GWi 7.2 region. The blue inverted triangles in the gene structure diagram represent the SNPs included in plotting the boxplots. Boxplots were generated to show the phenotypic distribution of haplotypes for raw and cooked GWi. Respective haplotypes mapped in 3,000 rice genome results were shown on the right panel.

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