Table 1 Datasets used in this study.

From: Quantifying the relative immune cell activation from whole tissue/organ-derived differentially expressed gene data

Study

Treatment

Samples

Dosage

Organs

Organism

Reference

GSE63332

With bCD, 6 hours after i.d. and i.p. injection

3 (PBS, i.d.) 3 (bCD, i.d.) 3 (PBS, i.p.) 3 (bCD, i.p.)

300 μg (bCD)

Spleen

Mus musculus

8

GSE7768

With LPS and MPL, 6 hours after i.v. injection

3 (PBS, i.v.) 3 (LPS, i.v.) 3 (MPL, i.v.)

10 μg (LPS) 30 μg (MPL)

Spleen

Mus musculus

9

GSE13587

With placebo and HPV-16-L1 VLP on cultured cells

7 (placebo) and 20 (vaccine)

2.5 μg (VLP)

PBMC

Homo Sapiens

13

GSE16879

With IFX infusion in patient with inflammatory bowel disease: UC and CD

12 (healthy) and 61 (disease)

2.0 μg (IFX)

Colon and Ileum mucosa

Homo Sapiens

21

  1. Abbreviations: bCD: hydroxypropyl-β-cyclodextrin; PBS: phosphate buffered saline; i.d.; intradermal; i.p.: intraperitoneal; i.v.: intravenous; LPS: lipopolysaccharide; MPL: monophosphoryl lipid A; HPV; human papillomavirus; VLP: virus-like particle; IFX: infliximab; UC: ulcerative colitis; CD: Crohn’s disease.