Table 1 Sequence characteristics of Cephalloscyllium umbratile mitochondrial genome.
Locus name | One Letter code | From | to | Size | Strand | Nr.of Aminao Acids | Anti-Coden | Inferred Initiation Coden | Inferred Termination Coden | GC_Percent | Intergenic nucleotides* |
---|---|---|---|---|---|---|---|---|---|---|---|
tRNA-Phe | F | 1 | 69 | 69 | H | GAA | 37.68% | 0 | |||
12S-rRNA | 70 | 1023 | 954 | H | 42.98% | 0 | |||||
tRNA-Val | V | 1024 | 1095 | 72 | H | TAC | 40.28% | 0 | |||
16S-rRNA | 1096 | 2764 | 1669 | H | 36.01% | 0 | |||||
tRNA-Leu | L | 2765 | 2839 | 75 | H | TAA | 44.00% | 0 | |||
ND1 | 2840 | 3814 | 975 | H | 324 | ATG | TAA | 38.97% | 3 | ||
tRNA-Ile | I | 3818 | 3886 | 69 | H | GAT | 39.13% | 1 | |||
tRNA-Gln | Q | 3888 | 3959 | 72 | L | TTG | 29.17% | 0 | |||
tRNA-Met | M | 3960 | 4029 | 70 | H | CAT | 40.00% | 0 | |||
ND2 | 4030 | 5075 | 1046 | H | 348 | ATG | TA | 37.86% | 0 | ||
tRNA-Trp | W | 5076 | 5144 | 69 | H | TCA | 33.33% | 1 | |||
tRNA-Ala | A | 5146 | 5214 | 69 | L | TGC | 31.88% | 0 | |||
tRNA-Asn | N | 5215 | 5287 | 73 | L | GTT | 34.25% | 36 | |||
tRNA-Cys | C | 5324 | 5389 | 66 | L | GCA | 51.52% | 1 | |||
tRNA-Tyr | Y | 5391 | 5460 | 70 | L | GTA | 47.14% | 1 | |||
COXI | 5462 | 7015 | 1554 | H | 517 | GTG | TAA | 38.61% | 0 | ||
tRNA-Ser | S | 7016 | 7086 | 71 | L | TGA | 45.07% | 3 | |||
tRNA-Asp | D | 7090 | 7159 | 70 | H | GTC | 32.86% | 7 | |||
COXII | 7167 | 7857 | 691 | H | 230 | ATG | T | 38.35% | 0 | ||
tRNA-Lys | K | 7858 | 7932 | 75 | H | TTT | 44.00% | 1 | |||
ATP8 | 7934 | 8101 | 168 | H | 55 | ATG | TAA | 30.95% | −22 | ||
ATP6 | 8080 | 8774 | 695 | H | 231 | ATG | TA | 37.55% | 0 | ||
COXIII | 8775 | 9560 | 786 | H | 261 | ATG | TAA | 42.88% | 2 | ||
tRNA-Gly | G | 9563 | 9632 | 70 | H | TCC | 27.14% | 0 | |||
ND3 | 9633 | 9981 | 349 | H | 116 | ATG | T | 40.97% | 0 | ||
tRNA-Arg | R | 9982 | 10051 | 70 | H | TCG | 32.86% | 0 | |||
ND4L | 10052 | 10348 | 297 | H | 98 | ATG | TAA | 38.72% | −7 | ||
ND4 | 10342 | 11722 | 1381 | H | 460 | ATG | T | 37.73% | 0 | ||
tRNA-His | H | 11723 | 11791 | 69 | H | GTG | 18.84% | 0 | |||
tRNA-Ser | S | 11792 | 11858 | 67 | H | GCT | 37.31% | 0 | |||
tRNA-Leu | L | 11859 | 11930 | 72 | H | TAG | 48.61% | 0 | |||
ND5 | 11931 | 13760 | 1830 | H | 609 | ATG | TAA | 35.85% | −4 | ||
ND6 | 13757 | 14278 | 522 | L | 173 | ATG | TAA | 36.97% | 0 | ||
tRNA-Glu | E | 14279 | 14348 | 70 | L | TTC | 32.86% | 2 | |||
Cytb | 14351 | 15495 | 1145 | H | 381 | ATG | TA | 39.91% | 0 | ||
tRNA-Thr | T | 15496 | 15567 | 72 | H | TGT | 51.39% | 2 | |||
tRNA-Pro | P | 15570 | 15638 | 69 | L | TGG | 49.28% | 0 | |||
D-loop | 15639 | 16697 | 1059 | H | 31.35% | 0 |