Table 1 Sequence characteristics of Cephalloscyllium umbratile mitochondrial genome.

From: Sequencing and characterization of the complete mitochondrial genome of Japanese Swellshark (Cephalloscyllium umbratile)

Locus name

One Letter code

From

to

Size

Strand

Nr.of Aminao Acids

Anti-Coden

Inferred Initiation Coden

Inferred Termination Coden

GC_Percent

Intergenic nucleotides*

tRNA-Phe

F

1

69

69

H

 

GAA

  

37.68%

0

12S-rRNA

 

70

1023

954

H

    

42.98%

0

tRNA-Val

V

1024

1095

72

H

 

TAC

  

40.28%

0

16S-rRNA

 

1096

2764

1669

H

    

36.01%

0

tRNA-Leu

L

2765

2839

75

H

 

TAA

  

44.00%

0

ND1

 

2840

3814

975

H

324

 

ATG

TAA

38.97%

3

tRNA-Ile

I

3818

3886

69

H

 

GAT

  

39.13%

1

tRNA-Gln

Q

3888

3959

72

L

 

TTG

  

29.17%

0

tRNA-Met

M

3960

4029

70

H

 

CAT

  

40.00%

0

ND2

 

4030

5075

1046

H

348

 

ATG

TA

37.86%

0

tRNA-Trp

W

5076

5144

69

H

 

TCA

  

33.33%

1

tRNA-Ala

A

5146

5214

69

L

 

TGC

  

31.88%

0

tRNA-Asn

N

5215

5287

73

L

 

GTT

  

34.25%

36

tRNA-Cys

C

5324

5389

66

L

 

GCA

  

51.52%

1

tRNA-Tyr

Y

5391

5460

70

L

 

GTA

  

47.14%

1

COXI

 

5462

7015

1554

H

517

 

GTG

TAA

38.61%

0

tRNA-Ser

S

7016

7086

71

L

 

TGA

  

45.07%

3

tRNA-Asp

D

7090

7159

70

H

 

GTC

  

32.86%

7

COXII

 

7167

7857

691

H

230

 

ATG

T

38.35%

0

tRNA-Lys

K

7858

7932

75

H

 

TTT

  

44.00%

1

ATP8

 

7934

8101

168

H

55

 

ATG

TAA

30.95%

−22

ATP6

 

8080

8774

695

H

231

 

ATG

TA

37.55%

0

COXIII

 

8775

9560

786

H

261

 

ATG

TAA

42.88%

2

tRNA-Gly

G

9563

9632

70

H

 

TCC

  

27.14%

0

ND3

 

9633

9981

349

H

116

 

ATG

T

40.97%

0

tRNA-Arg

R

9982

10051

70

H

 

TCG

  

32.86%

0

ND4L

 

10052

10348

297

H

98

 

ATG

TAA

38.72%

−7

ND4

 

10342

11722

1381

H

460

 

ATG

T

37.73%

0

tRNA-His

H

11723

11791

69

H

 

GTG

  

18.84%

0

tRNA-Ser

S

11792

11858

67

H

 

GCT

  

37.31%

0

tRNA-Leu

L

11859

11930

72

H

 

TAG

  

48.61%

0

ND5

 

11931

13760

1830

H

609

 

ATG

TAA

35.85%

−4

ND6

 

13757

14278

522

L

173

 

ATG

TAA

36.97%

0

tRNA-Glu

E

14279

14348

70

L

 

TTC

  

32.86%

2

Cytb

 

14351

15495

1145

H

381

 

ATG

TA

39.91%

0

tRNA-Thr

T

15496

15567

72

H

 

TGT

  

51.39%

2

tRNA-Pro

P

15570

15638

69

L

 

TGG

  

49.28%

0

D-loop

 

15639

16697

1059

H

    

31.35%

0

  1. + and correspond to the H and L strands, respectively.