Table 3 Codon usage of Cephalloscyllium umbratile mitochondrial protein-coding genes.

Ala

GCC

117

3.07

1.65

CAC

56

1.47

1.19

GCA

87

2.28

1.23

CAT

38

0.99

0.81

GCT

76

1.99

1.07

Ile

ATT

246

6.45

1.43

GCG

4

0.11

0.06

ATC

98

2.57

0.57

Arg

CGA

40

1.05

2.19

Leu

TTA

229

6.01

2.08

CGT

16

0.42

0.88

CTA

153

4.02

1.39

CGC

13

0.34

0.71

CTT

145

3.81

1.32

CGG

4

0.10

0.22

CTC

90

2.36

0.82

Asn

AAT

96

2.52

1.28

TTG

24

0.63

0.22

AAC

54

1.42

0.72

CTG

18

0.47

0.16

Asp

GAT

44

1.15

1.31

Lys

AAA

77

2.02

1.90

GAC

23

0.60

0.69

AAG

4

0.10

0.10

Cys

TGT

16

0.42

1.19

Met

ATA

136

3.57

1.53

TGC

11

0.29

0.81

ATG

42

1.10

0.47

Gln

CAA

89

2.34

1.85

Phe

TTT

146

3.83

1.24

CAG

7

0.18

0.15

TTC

89

2.34

0.76

GAA

89

2.34

1.71

Pro

CCA

87

2.28

1.67

GAG

15

0.39

0.29

CCC

76

1.99

1.45

Gly

GGA

88

2.31

1.53

CCT

42

1.10

0.80

GGC

57

1.50

0.99

CCG

4

0.10

0.08

GGT

51

1.34

0.89

Ser

TCA

89

2.34

1.99

GGG

34

0.89

0.59

TCT

62

1.63

1.38

His

CAC

56

1.47

1.19

TCC

58

1.52

1.29

Amino acid

Codon

Number

Frequency (%)

RSCU

Amino acid

Codon

Number

Frequency (%)

RSCU

AGC

34

0.89

0.76

ACG

7

0.18

0.1

AGT

21

0.55

0.47

Trp

TGA

107

2.81

1.78

TCG

5

0.13

0.11

TGG

13

0.34

0.22

Stp*

TAA

7

0.18

4

Tyr

TAT

88

2.31

1.45

AGA

0

0

0

TAC

33

0.87

0.55

AGG

0

0

0

Val

GTA

80

2.10

1.76

TAG

0

0

0

GTT

52

1.36

1.14

Thr

ACA

117

3.07

1.67

GTC

31

0.81

0.68

ACC

99

2.60

1.41

GTG

19

0.50

0.42

ACT

57

1.50

0.81