Figure 5 | Scientific Reports

Figure 5

From: Adding loci improves phylogeographic resolution in red mangroves despite increased missing data: comparing microsatellites and RAD-Seq and investigating loci filtering

Figure 5

Histograms showing the distribution of the 100 samplings of loci from a larger data set. In the first two panels, six and seven SSR loci, respectively, were randomly sampled 100 times from the SSR_8 data set, and the distribution of the 100 calculations of F ST are shown. The solid blue line indicates the parameter value estimated using all eight loci, and the dashed blue lines show the 95% confidence interval. In the remaining five plots, the histogram shows parameter estimates using the number of loci (239, 1,180, 2,317, 3,831, and 6,255, respectively) in the data set randomly sampled from RAD_25198 100 times. The solid blue lines indicate the F ST value estimated using all 25,198 loci, and the dashed blue lines show the 95% confidence interval. The solid orange lines indicate F ST estimated using the original data set (RAD_239, RAD_1180, RAD_2317, RAD_3831, and RAD_6255, respectively) and dashed orange lines show the 95% confidence interval for this estimate.

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