Table 1 Transcript levels of genetic competence-related genes in ΔciaR and ΔciaR/ciaR.
Synonym | Name | Annotation | ΔciaR | ΔciaR/ciaR | ||
|---|---|---|---|---|---|---|
fold change | qvalue | fold change | qvalue | |||
SSA_2394 | comC | competence stimulating peptide | 24.46 | 0.00E + 00 | 0.84 | 1.00E + 00 |
SSA_2379 | comD | signal transduction protein | 35.15 | 0.00E + 00 | 0.93 | 7.73E−01 |
SSA_2378 | comE | two-component system LytR/AlgR family transcriptional regulator | 12.76 | 0.00E + 00 | 0.74 | 8.54E−01 |
SSA_0715 | comEA | DNA uptake protein | 93.00 | 0.00E + 00 | 1.00 | 1.00E + 00 |
SSA_1497 | comEB | dCMP deaminase | 1.24 | 5.07E−06 | 1.07 | 5.70E−02 |
SSA_0716 | comEC | competence protein | 78.00 | 0.00E + 00 | 1.00 | 1.00E + 00 |
SSA_1836 | comFA | superfamily II ATP-dependent DNA/RNA helicase | 78.00 | 0.00E + 00 | 1.00 | 1.00E + 00 |
SSA_1835 | comFC | late competence protein | 94.00 | 0.00E + 00 | 1.00 | 1.00E + 00 |
SSA_0189 | comGF | competence protein ComGF | 81.00 | 0.00E + 00 | 1.00 | 1.00E + 00 |
SSA_0016 | comX | ComX1, transcriptional regulator of competence-specific genes | 56.25 | 0.00E + 00 | 0.51 | 1.20E−02 |
SSA_0184 | comYA | competence protein ComYA | 226.00 | 0.00E + 00 | 1.00 | 1.00E + 00 |
SSA_0185 | comYB | competence protein ComYB | 143.00 | 0.00E + 00 | 1.00 | 1.00E + 00 |
SSA_0186 | comYC | competence protein ComYC | 62.00 | 0.00E + 00 | 1.00 | 1.00E + 00 |
SSA_0187 | comYD | competence protein ComYD | 76.00 | 0.00E + 00 | 1.00 | 1.00E + 00 |
SSA_2246 | cinA | competence damage-inducible protein A | 11.05 | 0.00E + 00 | 1.00 | 2.84E−01 |
SSA_0749 | coiA | competence protein | 8.00 | 0.00E + 00 | 1.00 | 1.00E + 00 |
