Table 1 Data collection and refinement statistics.
From: Towards high throughput GPCR crystallography: In Meso soaking of Adenosine A2A Receptor crystals
Compound 4e (1 hour soak) 5OM1 | Compound 4e (24 hour soak) 5OM4 | Compound 4e (Bespoke) 5OLZ | Tozadenant (24 hour soak) 5OLO | Vipadenant (24 hour soak) 5OLH | LUAA47070 (24 hour soak) 5OLV | ZM241385 (24 hour soak) 5OLG | |
---|---|---|---|---|---|---|---|
Data collection | |||||||
Space group | C2221 | C2221 | C2221 | C2221 | C2221 | C2221 | C2221 |
Cell dimensions | |||||||
a, b, c (Å) | 39.54, 179.85, 140.32 | 39.47, 179.11, 140.03 | 39.37, 179.25, 140.07 | 39.38, 181.10, 141.77 | 39.40, 179.33, 141.14 | 39.43, 180.77, 140.90 | 39.45, 179.39, 139.60 |
α, β, γ (°) | 90, 90, 90 | 90, 90, 90 | 90, 90, 90 | 90, 90, 90 | 90, 90, 90 | 90, 90, 90 | 90, 90, 90 |
Resolution (Å) | 33.83–2.10 (2.16–2.10)a | 32.92–2.00 (2.05–2.00)a | 33.71–1.90 (1.94–1.90)a | 38.48–3.10 (3.21–3.10)a | 29.82–2.60 (2.72–2.60)a | 76.08–2.00 (2.05–2.00)a | 46.53–1.85 (1.89–1.85)a |
R pim | 0.061 (0.564)a | 0.059 (0.635)a | 0.040 (0.583)a | 0.078 (0.559)a | 0.097 (0.547)a | 0.059 (0.624)a | 0.068 (0.935)a |
I/σ(I) | 10.0 (1.5)a | 10.3 (1.3)a | 11.3 (1.4)a | 8.3 (1.5)a | 8.3 (1.8)a | 8.0 (1.3)a | 7.7 (1.0)a |
CC 1/2 | 0.997 (0.524)a | 0.998 (0.439)a | 0.999 (0.421)a | 0.997 (0.480)a | 0.988 (0.519)a | 0.997 (0.420)a | 0.994 (0.372)a |
Completeness (%) | 100.0 (100.0)a | 98.4 (98.8)a | 99.3 (99.6)a | 99.9 (100.0)a | 99.5 (98.7)a | 98.5 (94.1)a | 99.7 (100)a |
Redundancy | 6.6 (6.7)a | 6.3 (6.5)a | 4.7 (4.8)a | 5.7 (5.9)a | 6.9 (5.1)a | 3.6 (3.7)a | 6.2 (6.4)a |
Refinement | |||||||
Resolution (Å) | 33.83–2.10 | 32.92–2.00 | 33.71–1.90 | 38.48–3.10 | 29.82–2.60 | 41.68–2.00 | 41.31–1.86 |
No. reflections | 56388 | 63810 | 74939 | 9645 | 15827 | 34169 | 41376 |
R work/R free | 0.1882/0.2097 | 0.1831/0.2049 | 0.1727/0.1963 | 0.1987/0.2448 | 0.2000/0.2487 | 0.1801/0.2081 | 0.1921/0.2332 |
No. atoms | |||||||
Protein | 3082 | 3083 | 3104 | 2983 | 3047 | 3083 | 3097 |
Ligand | 21 | 21 | 21 | 28 | 24 | 24 | 25 |
Solvent | 687 | 727 | 684 | 397 | 488 | 607 | 597 |
B factors | |||||||
Protein | 40.55 | 39.22 | 45.33 | 80.98 | 43.21 | 40.19 | 36.81 |
Ligand | 19.40 | 17.37 | 20.13 | 49.00 | 21.26 | 18.28 | 27.17 |
Solvent | 55.49 | 56.88 | 59.69 | 87.00 | 51.60 | 51.83 | 49.20 |
R.m.s. deviations | |||||||
Bond lengths (Å) | 0.002 | 0.003 | 0.004 | 0.002 | 0.003 | 0.009 | 0.014 |
Bond angles (°) | 0.92 | 0.93 | 0.99 | 0.74 | 0.75 | 1.19 | 1.54 |