Table 2 Description of pathways overrepresented in co-expression modules associated to feed efficiency identified in both liver and duodenum tissues.
Cannonical Pathways | Tissues (Module) | -log(p-value) | Genes |
|---|---|---|---|
Aldosterone Signaling in Epithelial Cells | duodenum (Darkgreen) | 5.80 | HSPH1,DNAJB1,DNAJA1,HSPA2,HSPA4L |
liver (Yellow) | 4.79 | HSPA4,CRYAB,HSP90AB1,DNAJB4,SGK1,HSPH1,HSPB8,HSPD1,DNAJA1,HSPA2,DNAJB5,HSPA4L | |
Cell Cycle: G1/S Checkpoint Regulation | duodenum (Salmon) | 1.64 | RPL11,RPL5 |
liver (Yellow) | 1.71 | MYC,SMAD3,CDKN2C,E2F3 | |
IL-1 Signaling | duodenum (Salmon) | 1.35 | TRAF6,GNAS |
liver (Yellow) | 2.46 | FOS,JUN,NFKBIE,NFKB2,NFKB1,IRAK2 | |
IL-8 Signaling | duodenum (Salmon) | 1.44 | TRAF6,GNAS,PGF |
liver (Yellow) | 4.72 | FOS,VCAM1,JUN,ICAM1,RND3,RHOB,HBEGF,VEGFC,LIMK2,PTGS2,NFKB1,FNBP1,IRAK2 | |
NRF2-mediated Oxidative Stress Response | duodenum (Darkgreen) | 2.78 | NQO1,DNAJB1,DNAJA1 |
liver (Yellow) | 4.15 | FOS,UBB,JUN,DNAJB4,GSTA4,STIP1,DNAJA4,HSPB8,DNAJA2,DNAJA1,MAFF,DNAJB5 | |
Role of RIG1-like Receptors in Antiviral Innate Immunity | duodenum (Darkred) | 1.32 | CASP10 |
liver (Yellow) | 1.50 | NFKBIE,NFKB2,NFKB1 | |
Unfolded protein response | duodenum (Darkgreen) | 2.7 | HSPH1,HSPA2 |
liver (Yellow) | 3.66 | HSPA4,INSIG1,HSPH1,PPP1R15A,DNAJA2,HSPA2 | |
Protein Ubiquitination Pathway | duodenum (Darkred) | 1.48 | HSPE1,ANAPC10 |
duodenum (Darkgreen) | 4.89 | HSPH1,DNAJB1,DNAJA1,HSPA2,HSPA4L | |
liver (Yellow) | 5.40 | UBB,CRYAB,DNAJB4,HSPH1,HSPB8,THOP1,HSPD1,DNAJA1,HSPA2,HSPA4,HSP90AB1,UBE2B,NEDD4L,DNAJB5,HSPA4L,BIRC2 |
