Figure 3 | Scientific Reports

Figure 3

From: Peach RNA viromes in six different peach cultivars

Figure 3

Genome assembly of identified viruses and viroids using peach transcriptome data. We obtained the complete or nearly complete genome of several viruses and viroids. The genome organization of assembled viruses with accession number and the size of corresponding reference viral genomes and the alignment of associated contigs derived from individual peach transcriptome on each virus reference genome for ACLSV (a), APCLSV (b), APV1 (c), APV2 (d), CNRMV (e), HSVd (f), and PLMVd (g). Abbreviations for open reading frames: movement protein (MP), coat protein (CP), triple gene block (TGB). In the case of viroids with a circular RNA genome, we used a linear RNA genome for the alignment of contigs associated with each viroid. (h) RT-PCR results showing amplification of partial sequences for APV1 and APV2 using APV1- and APV2-specific primers in BC and JH peach cultivars.

Back to article page