Table 1 The characteristics of the four DNA barcode loci.
DNA marker | Recovery rate (%) | Sequence length (bp) | Aligned sequence length (bp) | G + C ratio (%) | No. variable sites (%) | No. parsimony informative sites (%) | Indel length (bp) |
|---|---|---|---|---|---|---|---|
ITS2 | 66.67 | 219–224 | 234 | 66.1 | 75 (32.05) | 69 (29.49) | 16 |
matK | 82.05 | 273 | 239 | 36.0 | 10 (4.18) | 10 (4.18) | 0 |
ndhF-rpl32 | 89.74 | 167–173 | 173 | 26.6 | 14 (8.09) | 12 (6.94) | 6 |
rbcL | 69.67 | 485 | 350 | 40.6 | 47 (13.43) | 15 (4.29) | 0 |
