Table 1 Genus level differences in abundance of duodenal microbiota among treatment groups.

From: Interaction of genotype and diet on small intestine microbiota of Japanese quail fed a cholesterol enriched diet

 

RC

SC

RE

SE

P

Escherichia §

4.03 ± 1.05A

0.33 ± 0.33B

0.63 ± 0.17B

0.82 ± 0.17B

0.003

Streptococcus §

0.64 ± 0.49AB

0.00 ± 0.00B

0.29 ± 0.21AB

1.66 ± 0.60A

0.021

Staphylococcus §

0.96 ± 0.50AB

0.00 ± 0.00B

0.00 ± 0.00B

2.10 ± 1.15A

0.025

Uncl. Enterobacteriaceae§

0.31 ± 0.19A

0.00 ± 0.00B

0.00 ± 0.00B

0.25 ± 0.16AB

0.038

Alicyclobacillus †

0.58 ± 0.28

0.00 ± 0.00

0.07 ± 0.07

0.12 ± 0.12

0.059

 

Control diet

Cholesterol diet

P

Uncl. Rikenellaceae*

0.00 ± 0.00

0.92 ± 0.36

0.023

Uncl. Coprobacillaceae*

0.51 ± 0.21

3.65 ± 1.49

0.044

Blautia*

0.30 ± 0.16

1.94 ± 0.77

0.045

Collinsella*

0.29 ± 0.21

1.09 ± 0.32

0.050

 

RES

SUS

P

Bacteroides ‡

3.00 ± 0.91

0.20 ± 0.11

0.007

Enterococcus ‡

0.28 ± 0.17

2.79 ± 1.13

0.047

  1. §Significant diet X host genotype interaction.
  2. †Effect of diet X host genotype interaction tends to be significant (P < 0.059).
  3. *Significant diet effect.
  4. ‡Significant host genotype effect.
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