Table 1 Summary of Primary Non Function microRNA selected for in silico analysis. Mature microRNA (miRNA) identifiers have been used from miRBase. Table summarizes miRNA array fold change, accession number and sequence, total number of miRNA gene targets as identified by miRDB v21, total number of miRNA gene targets recorded in MitoMiner4.0 and number of MitoMiner4.0 identified genes with an Integrated Mitochondrial Protein Index (IMPI) score >0.7. miRNA that have been experimentally isolated from mitochondria is marked “yes”(Y) to identify as a MitomiR.

From: An in silico argument for mitochondrial microRNA as a determinant of primary non function in liver transplantation

miRNA

Fold Change (p < 0.05)

Accession Nos Sequence

miRDB

MitoMiner

IMPI > 0.7

MitomiR

miR-107

−1.8 (p = 0.02)

MI0000114

50-agcagcauuguacagggcuauca-72

433

29

1

Y5,55

miR-378

−1.6 (p = 0.04)

MIMAT0000731

5-cuccugacuccagguccugugu-26

169

17

0

Y66

miR-23b

−2.6 (p = 0.02)

MIMAT0000418

20-uggguuccuggcaugcugauuu-41

866

76

3

Y5,66

miR-122-5p

−6 (p = 0.02)

MIMAT0000421

15-uggagugugacaaugguguuug-36

187

23

0

Y67

miR-103a-3p

−2.2 (p = 0.02)

MIMAT0000101

48-agcagcauuguacagggcuauga-70

433

29

1

Y5,68

miR-125b-5p

−1.8 (p = 0.03)

MIMAT0000423

15-ucccugagacccuaacuuguga-36

476

21

0

Y5,66

miR-24

−2 (p = 0.04)

MIMAT0000080

44-uggcucaguucagcaggaacag-65

552

38

0

Y66

let-7a

−1.6 (p = 0.03)

MIMAT0000062

6-ugagguaguagguuguauaguu-27

435

24

0

Y66

miR-191-5p

−1.5 (p = 0.02)

MIMAT0000440

16-caacggaaucccaaaagcagcug-38

55

1

0

 

miR-194-5p

−1.6 (p = 0.04)

MIMAT0000460

15-uguaacagcaacuccaugugga-36

291

20

1

 

miR-296-3p

−1.6 (p = 0.02)

MIMAT0004679

48-gaggguuggguggaggcucucc-69

364

17

1

 

miR-455-3p

−1.6 (p = 0.03)

MIMAT0004784

54-gcaguccaugggcauauacac-74

305

13

0

 

miR-940

−2 (p = 0.01)

MIMAT0004983

60-aaggcagggcccccgcucccc-80

1024

75

1

 

let-7d-5p

−1.5 (p = 0.03)

MIMAT0000065

8-agagguaguagguugcauaguu-29

438

25

0

Y66

miR-22-3p

−1.6 (p = 0.047)

MIMAT0000077

53-aagcugccaguugaagaacugu-74

430

17

0

Y66

miR-155-5p

−2 (p = 0.01)

MIMAT0000646

4-uuaaugcuaaucgugauaggggu-26

311

19

0