Table 1 Summary of Primary Non Function microRNA selected for in silico analysis. Mature microRNA (miRNA) identifiers have been used from miRBase. Table summarizes miRNA array fold change, accession number and sequence, total number of miRNA gene targets as identified by miRDB v21, total number of miRNA gene targets recorded in MitoMiner4.0 and number of MitoMiner4.0 identified genes with an Integrated Mitochondrial Protein Index (IMPI) score >0.7. miRNA that have been experimentally isolated from mitochondria is marked “yes”(Y) to identify as a MitomiR.
miRNA | Fold Change (p < 0.05) | Accession Nos Sequence | miRDB | MitoMiner | IMPI > 0.7 | MitomiR |
---|---|---|---|---|---|---|
miR-107 | −1.8 (p = 0.02) | MI0000114 50-agcagcauuguacagggcuauca-72 | 433 | 29 | 1 | |
miR-378 | −1.6 (p = 0.04) | MIMAT0000731 5-cuccugacuccagguccugugu-26 | 169 | 17 | 0 | Y66 |
miR-23b | −2.6 (p = 0.02) | MIMAT0000418 20-uggguuccuggcaugcugauuu-41 | 866 | 76 | 3 | |
miR-122-5p | −6 (p = 0.02) | MIMAT0000421 15-uggagugugacaaugguguuug-36 | 187 | 23 | 0 | Y67 |
miR-103a-3p | −2.2 (p = 0.02) | MIMAT0000101 48-agcagcauuguacagggcuauga-70 | 433 | 29 | 1 | |
miR-125b-5p | −1.8 (p = 0.03) | MIMAT0000423 15-ucccugagacccuaacuuguga-36 | 476 | 21 | 0 | |
miR-24 | −2 (p = 0.04) | MIMAT0000080 44-uggcucaguucagcaggaacag-65 | 552 | 38 | 0 | Y66 |
let-7a | −1.6 (p = 0.03) | MIMAT0000062 6-ugagguaguagguuguauaguu-27 | 435 | 24 | 0 | Y66 |
miR-191-5p | −1.5 (p = 0.02) | MIMAT0000440 16-caacggaaucccaaaagcagcug-38 | 55 | 1 | 0 | |
miR-194-5p | −1.6 (p = 0.04) | MIMAT0000460 15-uguaacagcaacuccaugugga-36 | 291 | 20 | 1 | |
miR-296-3p | −1.6 (p = 0.02) | MIMAT0004679 48-gaggguuggguggaggcucucc-69 | 364 | 17 | 1 | |
miR-455-3p | −1.6 (p = 0.03) | MIMAT0004784 54-gcaguccaugggcauauacac-74 | 305 | 13 | 0 | |
miR-940 | −2 (p = 0.01) | MIMAT0004983 60-aaggcagggcccccgcucccc-80 | 1024 | 75 | 1 | |
let-7d-5p | −1.5 (p = 0.03) | MIMAT0000065 8-agagguaguagguugcauaguu-29 | 438 | 25 | 0 | Y66 |
miR-22-3p | −1.6 (p = 0.047) | MIMAT0000077 53-aagcugccaguugaagaacugu-74 | 430 | 17 | 0 | Y66 |
miR-155-5p | −2 (p = 0.01) | MIMAT0000646 4-uuaaugcuaaucgugauaggggu-26 | 311 | 19 | 0 |