Figure 8
Module analysis in another cell line. (A) Hierarchical clustering analyses were conducted using the genes included in the “magenta” module in PC9 (top) and II-18 cells (second). The expression levels (RPKM) of AURKA and DUSP1 are also shown in the bar plot (middle). The scatterplot shows the relationship between the expression levels of two genes, DUSP1 (x-axis) and AURKA (y-axis) (bottom). (B) Clustering of II-18 cells by the module “II-18-red.” Hierarchical clustering analyses were conducted using the genes included in the II-18 module “red” (top). The treatment of individual cells, their MEred value, their expression level of SOX4, their MEturquoise value and their CD44 expression level are shown. Two cells (s_252 and s_247) show low expression of SOX4 and high expression of CD44.
