Figure 3
From: Species Level Description of the Human Ileal Bacterial Microbiota
Core microbiota of the ileum. The inner circle represents the genus-level core microbiome defined as genera present in >50% of samples. The outer circle represents the species-level core microbiome defined as species present in >50% of samples. For the outer circle, the width of a segment is proportional to the observed incidence for that species. *Species level identification obtained with targeted gdh or rpoB Sanger sequencing. **Species level identification obtained with rpoB sequencing. Includes Gemella haemolysans sensu strictu (n = 7) and the newly proposed species Gemella para-haemolysans (n = 9) and Gemella taiwanensis (n = 6). #Only 0.7% distance to Streptococcus sinensis. Formally S. sanguinis (S. sinensis). §Only 0.7% distance to Oribacterium parvum. Formally O. sinus (O. parvum).
