Table 1 Percentage improvement of Acceptable (or better), Medium (or better) and High quality solutions by SSDU versus SDU and ClusPro for a benchmark of 224 complexes. Note that for each of the entries in the table, complexes with zero number of solutions for both ClusPro and SDU/SSDU are removed.

From: Protein docking refinement by convex underestimation in the low-dimensional subspace of encounter complexes

Benchmark

 

SSDU vs. ClusPro

SSDU vs. SDU

Acceptable (or better)

Average

24.62%

21.31%

Total

53.14%

30.37%

Medium (or better)

Average

53.26%

58.25%

Total

132.69%

112.43%

High

Average

410.71%

405.88%

Total

424.93%

157.06%